Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0806 |
Symbol | |
ID | 5321643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 868688 |
End bp | 869881 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789743 |
Product | hypothetical protein |
Protein accession | YP_001326497 |
Protein GI | 150396030 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.446873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACATA CGCGTAAAGT CCGCCTGATG CTGGCCAGCG TCGCCCTCTT TTCCCTCGCC GGACCGGCCA TGGCACTGGA CGGTGCGGAT ATGATGAAGA AGCTCAATGC GGCAACAACG CCCAACGGCT CTTCGGTAAG CTACGACACG GCAGAGGCCG ACGGCGACGT GGTGACGGTC ACCGGCATGA AGCTGCAGGT GGCGGCAGAA CCCGGCAAAT CCATCGACAT CGGCGACGTG ACGTTCGAGG GCGTAGAGGA AACCGAAGGC GGCGGCTATT ATGCCGAAAC CGTCTCTTTC CCGGACATCG CCGTCAGCGA GAAGGATGCA AGCTTCTCGG TCAAGGACAT CGCGATCGGG GGCCTGTCCA TTCCGGGCAA GGCGTCCGGC ACCACCATCG AGGACATTCT GCTTTACGAA ACGGCCGGCA CGGGCCCGAT GACCGTGAGC GTCAAAGGCA AGGACGTCTT CACCGCCGAG CGCACGGAGA CCAATCTGAC GCGACAGGAA GACAATGCGG GCCTCGACTT CGACGCGAGG CTCGCCGGCA TCAAGGCGGA TCTGTCTGGA ATCGAGGATG CCAAAGCCAA GGATGCGGTC GAGCAGCTCG GGCTGACGAC GCTCGACGGC GAAGTCACGA TGAAGGGCAG TTGGGAGCTG GAAAGCGGAA ACCTCGCTCT CGACGAATAC GCCCTGGACT TCACGAATGT CGGGCGGCTG AACATCGCCA TGGACTTCTC CGGCTACACA CCGCAATTCA TGAGATCGCT GCAGGAGGCC GCGAAAGCGG CAGAAGCCAA CCCGAACAAG GAAGAAGCCA ACCAGGCGAT GGGGCTGGCC ATGCTCGGGC TGATGCAGCA GCTGACCTTC AACAGCGCCT CGATCCGTTT CGATGATGCA TCGATCACGA AAAAGGCGCT CGACTACGCC GGCAGCCAGC AGGGCGTCAC CGGCGAGCAG CTGGCGCAAT CGTTGAAGGG TCTCGTTCCG ATCATGATGG CGCAGCTTAA CGTGCCGGAA CTTCAGAACC AGGTCACCAG CGCCGTCAAC GCCTTCCTCG ACGAACCGAA GAGCCTGACC ATCAGCGCCA AGCCGGAGAA ACCGGTCCCC TTCCCGATGA TCATGGGTGC GGCAATGGGT GCTCCCAACA CGATCCCGTC CGTGCTCGGG GTCAAGGTCA CGGCGAACGA CTGA
|
Protein sequence | MIHTRKVRLM LASVALFSLA GPAMALDGAD MMKKLNAATT PNGSSVSYDT AEADGDVVTV TGMKLQVAAE PGKSIDIGDV TFEGVEETEG GGYYAETVSF PDIAVSEKDA SFSVKDIAIG GLSIPGKASG TTIEDILLYE TAGTGPMTVS VKGKDVFTAE RTETNLTRQE DNAGLDFDAR LAGIKADLSG IEDAKAKDAV EQLGLTTLDG EVTMKGSWEL ESGNLALDEY ALDFTNVGRL NIAMDFSGYT PQFMRSLQEA AKAAEANPNK EEANQAMGLA MLGLMQQLTF NSASIRFDDA SITKKALDYA GSQQGVTGEQ LAQSLKGLVP IMMAQLNVPE LQNQVTSAVN AFLDEPKSLT ISAKPEKPVP FPMIMGAAMG APNTIPSVLG VKVTAND
|
| |