Gene Smed_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0806 
Symbol 
ID5321643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp868688 
End bp869881 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content61% 
IMG OID640789743 
Producthypothetical protein 
Protein accessionYP_001326497 
Protein GI150396030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.446873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACATA CGCGTAAAGT CCGCCTGATG CTGGCCAGCG TCGCCCTCTT TTCCCTCGCC 
GGACCGGCCA TGGCACTGGA CGGTGCGGAT ATGATGAAGA AGCTCAATGC GGCAACAACG
CCCAACGGCT CTTCGGTAAG CTACGACACG GCAGAGGCCG ACGGCGACGT GGTGACGGTC
ACCGGCATGA AGCTGCAGGT GGCGGCAGAA CCCGGCAAAT CCATCGACAT CGGCGACGTG
ACGTTCGAGG GCGTAGAGGA AACCGAAGGC GGCGGCTATT ATGCCGAAAC CGTCTCTTTC
CCGGACATCG CCGTCAGCGA GAAGGATGCA AGCTTCTCGG TCAAGGACAT CGCGATCGGG
GGCCTGTCCA TTCCGGGCAA GGCGTCCGGC ACCACCATCG AGGACATTCT GCTTTACGAA
ACGGCCGGCA CGGGCCCGAT GACCGTGAGC GTCAAAGGCA AGGACGTCTT CACCGCCGAG
CGCACGGAGA CCAATCTGAC GCGACAGGAA GACAATGCGG GCCTCGACTT CGACGCGAGG
CTCGCCGGCA TCAAGGCGGA TCTGTCTGGA ATCGAGGATG CCAAAGCCAA GGATGCGGTC
GAGCAGCTCG GGCTGACGAC GCTCGACGGC GAAGTCACGA TGAAGGGCAG TTGGGAGCTG
GAAAGCGGAA ACCTCGCTCT CGACGAATAC GCCCTGGACT TCACGAATGT CGGGCGGCTG
AACATCGCCA TGGACTTCTC CGGCTACACA CCGCAATTCA TGAGATCGCT GCAGGAGGCC
GCGAAAGCGG CAGAAGCCAA CCCGAACAAG GAAGAAGCCA ACCAGGCGAT GGGGCTGGCC
ATGCTCGGGC TGATGCAGCA GCTGACCTTC AACAGCGCCT CGATCCGTTT CGATGATGCA
TCGATCACGA AAAAGGCGCT CGACTACGCC GGCAGCCAGC AGGGCGTCAC CGGCGAGCAG
CTGGCGCAAT CGTTGAAGGG TCTCGTTCCG ATCATGATGG CGCAGCTTAA CGTGCCGGAA
CTTCAGAACC AGGTCACCAG CGCCGTCAAC GCCTTCCTCG ACGAACCGAA GAGCCTGACC
ATCAGCGCCA AGCCGGAGAA ACCGGTCCCC TTCCCGATGA TCATGGGTGC GGCAATGGGT
GCTCCCAACA CGATCCCGTC CGTGCTCGGG GTCAAGGTCA CGGCGAACGA CTGA
 
Protein sequence
MIHTRKVRLM LASVALFSLA GPAMALDGAD MMKKLNAATT PNGSSVSYDT AEADGDVVTV 
TGMKLQVAAE PGKSIDIGDV TFEGVEETEG GGYYAETVSF PDIAVSEKDA SFSVKDIAIG
GLSIPGKASG TTIEDILLYE TAGTGPMTVS VKGKDVFTAE RTETNLTRQE DNAGLDFDAR
LAGIKADLSG IEDAKAKDAV EQLGLTTLDG EVTMKGSWEL ESGNLALDEY ALDFTNVGRL
NIAMDFSGYT PQFMRSLQEA AKAAEANPNK EEANQAMGLA MLGLMQQLTF NSASIRFDDA
SITKKALDYA GSQQGVTGEQ LAQSLKGLVP IMMAQLNVPE LQNQVTSAVN AFLDEPKSLT
ISAKPEKPVP FPMIMGAAMG APNTIPSVLG VKVTAND