Gene Smed_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0777 
Symbol 
ID5321614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp835827 
End bp836387 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID640789714 
Producthypothetical protein 
Protein accessionYP_001326468 
Protein GI150396001 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.25881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTG CCTGGACTGC ACATCGATTT TCAGGAGGCG CTCTGGCGCT CGACGTCGCC 
AATTCGGTGG TTCTGCGCTT CGATGCGGAG CGCCGGATCG ATCGCTTCGA CGATCCGGCG
GCGATCGACG CCTTTGCCGG AGCGGCCAAT CTCTACGGCG CGGAACGGAA ACGATTCGGT
CCGCTCATTC CCGCGCGGCT GGAGCGGCGA AACGCGTTCA TCGGATTGCG TGAAGCGACG
GACCGCCATT TCCGTGCGCT GGTGCGTACG GAAGACCGGC CCGATCTCCT CGCCGACCTG
CTCGAGGCGA TCGCCGCCGT CCTGCGCCAG CCGGCCCCCG CCGGCAAAGG CACGCCACTC
GATGTGGCTA CCGCCCATTC CGCGCTCGGC CTCATTTCCG GGCCGGAGCC AGGACGCCTG
AAGATATGCC CCAATTGCGC CTGGCTGTTT CTAGACCGCA GCCGCAACCG GAGCAGGACG
TGGTGCGACA TGGCGGTTTG CGGCAACCGG AGCAAGGCGA GGCGCCACTA CCGCCGCAGC
AGGGAGGAAC CGAAGCCATG A
 
Protein sequence
MGFAWTAHRF SGGALALDVA NSVVLRFDAE RRIDRFDDPA AIDAFAGAAN LYGAERKRFG 
PLIPARLERR NAFIGLREAT DRHFRALVRT EDRPDLLADL LEAIAAVLRQ PAPAGKGTPL
DVATAHSALG LISGPEPGRL KICPNCAWLF LDRSRNRSRT WCDMAVCGNR SKARRHYRRS
REEPKP