Gene Smed_0735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0735 
Symbol 
ID5321572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp789989 
End bp790441 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content62% 
IMG OID640789672 
ProductMarR family transcriptional regulator 
Protein accessionYP_001326426 
Protein GI150395959 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.711731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.77844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA CGAAGGTCAG TCGCGAACTG TTCGACGCGC TTGCGACGGT TAATCGCAAG 
CTGAGGTCGG TGTTCGACGC GCGGGTCAAG GAGCGCGGTC TAACGCTGCC CCGTGCGCGG
ATGCTGTTCG CTCTCGCCAG GAAAGAAGGT CTCAATCAAC GCGAATTGGC CGAAGAACTC
GATATCGAAA CGCCGACCAT AGTCCGGCTT CTCGACGGCA TGGAGAACCA GGGGTTCATC
GAGCGCCGCG TCGAACTTTC CGACCGGCGT GCGAAGCAGA TCTACATGAC GGTCTCCGGC
CGCGCGCTGG CGGAGGAGAT CCAGAAGCTT GCAAGCGATA TCCGCGAGGA GGTTCTGGGC
GGGCTGCGGC CGGAGGAGAT CGCCGGTGCG CTGAAGGTCG TCAACACGAT CGCAACGAAC
ATCCAGTCGA TCGGGCGGAG TGGCGGCCGA TGA
 
Protein sequence
MSETKVSREL FDALATVNRK LRSVFDARVK ERGLTLPRAR MLFALARKEG LNQRELAEEL 
DIETPTIVRL LDGMENQGFI ERRVELSDRR AKQIYMTVSG RALAEEIQKL ASDIREEVLG
GLRPEEIAGA LKVVNTIATN IQSIGRSGGR