Gene Smed_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0733 
Symbol 
ID5321570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp787841 
End bp788143 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content68% 
IMG OID640789670 
Productbranched-chain amino acid transport 
Protein accessionYP_001326424 
Protein GI150395957 
COG category[S] Function unknown 
COG ID[COG4541] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.257385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.712483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCG ATCCGCATAC GCTTCTTGCG ATTGTCACCA TGGCCGCTGC CACGATACTG 
ACCCGGCTCG GCGGTCTTGT CCTCATCCGA TTCGTGACGA TCGGCCCGAA ACAGAAACGG
GCCCTCGAGG CGATCCCGCC GGCGGTGCTG ATGGCCGTCA TCGCTCCGAC AGCGCTGGTC
ACCGGGCCGG CCGAAACGCT CGCGGCGCTC GCGACAGCGC TCGTCGCTAT GCGGCTGCCG
CTGCTTGCGG CGGTGGCGAC CGGGGTGATG GTGGTCGCGC TTGCGAGGAT GTTCGGGGCG
TGA
 
Protein sequence
MTLDPHTLLA IVTMAAATIL TRLGGLVLIR FVTIGPKQKR ALEAIPPAVL MAVIAPTALV 
TGPAETLAAL ATALVAMRLP LLAAVATGVM VVALARMFGA