Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0727 |
Symbol | |
ID | 5321564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 781107 |
End bp | 782597 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789664 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001326418 |
Protein GI | 150395951 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC TCAGATCCAG CGAAATCCAT GACGAACTCG AGGGCGACAC CCTCCACGAA GAATGCGGCG TTTTCGGCAT TCTCGGACAT CCGGACGCAG CAACCCTGAC GGCGCTTGGC CTGCACGCGC TCCAGCATCG CGGCCAGGAG GCAGCCGGTA TCGTTACGAC CGACGGCAAG CAGTTCTATA CGGAAAAGCG CATGGGTCTC GTCGGAGATC ATTACACGGA CCCCGCGACA CTCGCCAAGC TGCCGGGCTA TATCTCCATC GGGCATACGC GCTATTCGAC GACCGGCGAG GTGGCGCTGC GCAACGTCCA GCCGCTCTTT GCCGAACTCG AAGTCGGCGG CATCGCGGTC GCCCATAACG GCAACTTCAC GAATGGCCTG ACGCTTCGCC GCCAGTTGAT TGCCGACGGT GCGATCTGTC AGTCGACCTC GGACACCGAA GTCGTCCTTC ACCTCATCGC CCGTTCCAAG CAGGCCTCTT CCTCCGATCG CTTCATCGAC GCCATCCGCC AGATGGAAGG CGGCTATTCG ATGCTGGCGA TGACTCGAAC CAAGCTGATC GCCGCACGCG ACCCGATCGG CATCCGCCCG CTGGTCATGG GCGAGCTCGA CGGCAAGCCC ATCTTCTGCT CGGAAACCTG CGCACTCGAC ATCATCGGTG CCAAGTACAT CCGCGATATC GAGAACGGCG AAGTCGTCAT CTGCGAGATC CAGCCGGACG GCTCGATTTC GGTCGATGCG CGCAAACCGC AATCAGCGCA GCCTGAGCGG CCCTGCCTCT TCGAATATGT CTACTTCGCG CGTCCGGACT CCGTCGTCGC AGGGCGCAGC GTCTATGTGG CCCGCAAGAA CATGGGCGTC CATCTCGCCG AAGAATCACC GATCGATGCG GACGTCGTCG TTCCTGTACC CGATGGTGGC ACGCCGGCTG CGCTCGGCTA CGCACAGCGC AGCGGCATCC CCTTCGAATA CGGGATCATC CGCAATCACT ATGTCGGTCG AACCTTCATC GAGCCGACTC AGCAGATCCG CGCCTTCGGC GTCAAGCTCA AGCATTCCGC GAACCGGGCG ATGATCGCCG GCAAGCGCGT CGTGCTCGTC GACGATTCGA TCGTTCGCGG CACCACCTCG GTCAAGATCG TGCAGATGAT CCGCGATGCC GGGGCGCGCG AAGTGCATTT GCGCGTCGCC AGCCCGATGA TCTTCCATCC GGATTTCTAC GGCATCGATA CTCCCGACCG TGACAAGCTG CTCGCCAACC AGCATGCGGA TCTAGCGTCG ATGTGCCGCT TCATCGGCGC CGATTCGCTT GCGTTCCTGT CGATCGACGG GCTTTATCGC GCTGTCGGCG GCGAGCCGCG CAACCGGCAG GCACCACAGT TCACCGATCA CTATTTCACC GGGGACTACC CGACCCGCCT TCTCGACCAG GGGGCGTCCA ACAACGTCCG CAAGCTTTCG GTCCTCGCCA GCAACGGATA A
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Protein sequence | MTDLRSSEIH DELEGDTLHE ECGVFGILGH PDAATLTALG LHALQHRGQE AAGIVTTDGK QFYTEKRMGL VGDHYTDPAT LAKLPGYISI GHTRYSTTGE VALRNVQPLF AELEVGGIAV AHNGNFTNGL TLRRQLIADG AICQSTSDTE VVLHLIARSK QASSSDRFID AIRQMEGGYS MLAMTRTKLI AARDPIGIRP LVMGELDGKP IFCSETCALD IIGAKYIRDI ENGEVVICEI QPDGSISVDA RKPQSAQPER PCLFEYVYFA RPDSVVAGRS VYVARKNMGV HLAEESPIDA DVVVPVPDGG TPAALGYAQR SGIPFEYGII RNHYVGRTFI EPTQQIRAFG VKLKHSANRA MIAGKRVVLV DDSIVRGTTS VKIVQMIRDA GAREVHLRVA SPMIFHPDFY GIDTPDRDKL LANQHADLAS MCRFIGADSL AFLSIDGLYR AVGGEPRNRQ APQFTDHYFT GDYPTRLLDQ GASNNVRKLS VLASNG
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