Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0725 |
Symbol | |
ID | 5321562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 778954 |
End bp | 780300 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789662 |
Product | transposase IS4 family protein |
Protein accession | YP_001326416 |
Protein GI | 150395949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGAC CACGCGAGCG GCGCGAGACG GGGGAGCAGG ATCTGTTCCG CTCCCGGCTG GATCAGATCA TCAACATGAG GCACGAACTG GTGCGGCTGG CGCAGGCGAT CGACTGGCCG CTGTTGGAGG GCCGCTTCGG CGAGGTCTAT TGCGATGGCC CCGGCATGCC GCCGCTGCCG ACGCGGCTGA TGGCGGGGCT GGCGATCCTT AAGCACACGT TCGACCTGTC GGACGAGGAG TTGTGTGCCC GCTGGGTGGA GAACCCCTAT TTCCAGTATC TCTGCGGCGA GGAATTCTTC CGCCACGACC TGCCCTTCGA CCGCTCGTCG ATGACGCGCT GGCGGGCGCG CATGGGCGAG GAGCGACTGA CGGCGCTGTT GCAGGAAAGC CTGGCGGTGG CGGTCAAGAC CGGGGCGATG CAGCCGCAGG ATACGCGCCG GGTAATCGTC GACACCACCG TGCAGCCGAA GAACGTGATG TTTCCGACCG ACGCGAAACT CCTCCATCGG GCGCGCGAGC GGCTCGTCCG CCTAGCCAAA AAGGCAGGGT TGACCTTGCG GCAATCCTAC ATACGGGTCG GCAAGCTGGC GCTGATCAAG CACCAGCGCT ACGCCCACGC CAAACAGTTC AAACGGGCCA ACAAGGCGTT GCGGACGCTC AGGACCTATC TCGGCCGCAC CATTCGCGAC ATTCGCCGCC AGATCGGCGA TGATGAGAAG CTGCGGTCGA TCTTCCTGTG GCCGCTGCAC CAGGCCTCGA CGGTTCTGGA GCAGAGGCAA CGCCAGCGCG GCCGCAAGAT CTACAGCCTG CATGCGCCGG AGGTCGAATG CATCGGCAAG GGCAAGGCGC ACCGGCCGTA CGAGTTCGGC GTCAAGGTCT CGGTCGCCAC CACGCTGAAA CGTTCGAAGG GTGGCCAGTT CGCCCTGCAT GCGAAAGCCA TGCCCGGCAA TCCCTATGAC GGCCATACGC TGGCAACGGT GATCCCGGAG ATGGAGAAAA CCGTCGGCAA TGAGATCGCC CGCATCCTCG CCGACGCCGG CTACCGCGGC CACAATGCCC CCGCCAGCCA CCGGTTCCGG ATCTTCACCA GCGGTCAGAA ACGCCGCGTC ACGCTAGCGA TCAAGCGCGA GATGCGGCGG CGTTCGGCCA TCGAGCCGGT CATCGGTCAT CTCAAGGCAG AGCACCGCAT GGGCCGCAAC TACCTCGCAG GCCAACACGG TGACGCCATC AACGCTGTGT TGGCAGCAGC CGGCTACAAC TTCTCGCTCC TCCTCAACTG GTTGAGGCAA TTTTTTTGGC TGCTCTTCGC CTGGGTGCAC GCCGCAGCCA ATCCGAACGC TGCTTAG
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Protein sequence | MSRPRERRET GEQDLFRSRL DQIINMRHEL VRLAQAIDWP LLEGRFGEVY CDGPGMPPLP TRLMAGLAIL KHTFDLSDEE LCARWVENPY FQYLCGEEFF RHDLPFDRSS MTRWRARMGE ERLTALLQES LAVAVKTGAM QPQDTRRVIV DTTVQPKNVM FPTDAKLLHR ARERLVRLAK KAGLTLRQSY IRVGKLALIK HQRYAHAKQF KRANKALRTL RTYLGRTIRD IRRQIGDDEK LRSIFLWPLH QASTVLEQRQ RQRGRKIYSL HAPEVECIGK GKAHRPYEFG VKVSVATTLK RSKGGQFALH AKAMPGNPYD GHTLATVIPE MEKTVGNEIA RILADAGYRG HNAPASHRFR IFTSGQKRRV TLAIKREMRR RSAIEPVIGH LKAEHRMGRN YLAGQHGDAI NAVLAAAGYN FSLLLNWLRQ FFWLLFAWVH AAANPNAA
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