Gene Smed_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0719 
Symbol 
ID5321556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp771249 
End bp772190 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content60% 
IMG OID640789656 
Producttransporter DMT superfamily protein 
Protein accessionYP_001326410 
Protein GI150395943 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.727095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.645388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC CGAATGCGAA ATTGAACGCA GAGAATACCG ATTCCGCGAG AGGTTTCGCC 
TTCGCGCTCG CCGCATATCT TCTATGGGGC TTCCTGCCTT TCTTCATGAA GGCGGTGGCG
CATATTCCCG CGGCTGAAGT CGTTGCGCAT CGTATCGTCT GGTCGGTCCC GCTTGCCGGT
CTCGTGCTGC TGTGGATCGG CCGGACGCAG GATGTTAAAG TTGCGCTGCG GTCTCCTCGC
GTGCTGATGA TGGCTACGCT CACCGCAGGG CTCATCACCG TCAACTGGGG TATCTATGTC
TGGGCGATCG GGGCGGGACG GGCTATAGAG ACGGCCCTGG GCTACTATAT CAATCCTTTG
TTCTCCATCT TTCTGGGCGC GCTGTTGCTC AAGGAGAGAC CTAATCCGGC GCAGATGGTG
GCAATCGGTC TCGCCGCGGT CGCCGTCGGT GTGCTTGCCT TCGACGCGGG TGGTCTCCCC
TGGGTCTCGC TCGGACTGTG TTTTTCCTGG GGCTTCTACG CGTTTTTCCG CAAAACGCTG
CCTGTCGGTC CAAACCAGGG CTTTTTCCTC GAAGTCTTGC TGCTCAGCAT CCCCGCCGCC
GGCTACATCA TCTGGCTCGA GGCTGCCGGG CAGGGACACT TCTTCGGTTA CACCAGCATG
ACCGATGTTC TGCTGCTCCT CGCCTGCGGC GTCGTCACCG CCGTGCCTTT GATGATCTAT
GCCAATGGGG CAAAGCTGCT CCGGCTCTCG ACGATCGGGA TCATGCAATA TATCGCTCCG
ACGATGATCT TCCTGATCGC CGTCTTCGTC TTTCACGAAC CTTTCGGAAC GGCGAAGCTC
GTTGCTTTCG CACTGATCTG GGCTGCGCTC TTCATCTATT CGGGAGCGAT GCTGCAGGAG
AGCAGGGCAC GGCGCGCGGC GCAACCGACA CCGGCCGAAT AG
 
Protein sequence
MAEPNAKLNA ENTDSARGFA FALAAYLLWG FLPFFMKAVA HIPAAEVVAH RIVWSVPLAG 
LVLLWIGRTQ DVKVALRSPR VLMMATLTAG LITVNWGIYV WAIGAGRAIE TALGYYINPL
FSIFLGALLL KERPNPAQMV AIGLAAVAVG VLAFDAGGLP WVSLGLCFSW GFYAFFRKTL
PVGPNQGFFL EVLLLSIPAA GYIIWLEAAG QGHFFGYTSM TDVLLLLACG VVTAVPLMIY
ANGAKLLRLS TIGIMQYIAP TMIFLIAVFV FHEPFGTAKL VAFALIWAAL FIYSGAMLQE
SRARRAAQPT PAE