Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0719 |
Symbol | |
ID | 5321556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 771249 |
End bp | 772190 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789656 |
Product | transporter DMT superfamily protein |
Protein accession | YP_001326410 |
Protein GI | 150395943 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.727095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.645388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC CGAATGCGAA ATTGAACGCA GAGAATACCG ATTCCGCGAG AGGTTTCGCC TTCGCGCTCG CCGCATATCT TCTATGGGGC TTCCTGCCTT TCTTCATGAA GGCGGTGGCG CATATTCCCG CGGCTGAAGT CGTTGCGCAT CGTATCGTCT GGTCGGTCCC GCTTGCCGGT CTCGTGCTGC TGTGGATCGG CCGGACGCAG GATGTTAAAG TTGCGCTGCG GTCTCCTCGC GTGCTGATGA TGGCTACGCT CACCGCAGGG CTCATCACCG TCAACTGGGG TATCTATGTC TGGGCGATCG GGGCGGGACG GGCTATAGAG ACGGCCCTGG GCTACTATAT CAATCCTTTG TTCTCCATCT TTCTGGGCGC GCTGTTGCTC AAGGAGAGAC CTAATCCGGC GCAGATGGTG GCAATCGGTC TCGCCGCGGT CGCCGTCGGT GTGCTTGCCT TCGACGCGGG TGGTCTCCCC TGGGTCTCGC TCGGACTGTG TTTTTCCTGG GGCTTCTACG CGTTTTTCCG CAAAACGCTG CCTGTCGGTC CAAACCAGGG CTTTTTCCTC GAAGTCTTGC TGCTCAGCAT CCCCGCCGCC GGCTACATCA TCTGGCTCGA GGCTGCCGGG CAGGGACACT TCTTCGGTTA CACCAGCATG ACCGATGTTC TGCTGCTCCT CGCCTGCGGC GTCGTCACCG CCGTGCCTTT GATGATCTAT GCCAATGGGG CAAAGCTGCT CCGGCTCTCG ACGATCGGGA TCATGCAATA TATCGCTCCG ACGATGATCT TCCTGATCGC CGTCTTCGTC TTTCACGAAC CTTTCGGAAC GGCGAAGCTC GTTGCTTTCG CACTGATCTG GGCTGCGCTC TTCATCTATT CGGGAGCGAT GCTGCAGGAG AGCAGGGCAC GGCGCGCGGC GCAACCGACA CCGGCCGAAT AG
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Protein sequence | MAEPNAKLNA ENTDSARGFA FALAAYLLWG FLPFFMKAVA HIPAAEVVAH RIVWSVPLAG LVLLWIGRTQ DVKVALRSPR VLMMATLTAG LITVNWGIYV WAIGAGRAIE TALGYYINPL FSIFLGALLL KERPNPAQMV AIGLAAVAVG VLAFDAGGLP WVSLGLCFSW GFYAFFRKTL PVGPNQGFFL EVLLLSIPAA GYIIWLEAAG QGHFFGYTSM TDVLLLLACG VVTAVPLMIY ANGAKLLRLS TIGIMQYIAP TMIFLIAVFV FHEPFGTAKL VAFALIWAAL FIYSGAMLQE SRARRAAQPT PAE
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