Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0643 |
Symbol | |
ID | 5321479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 695208 |
End bp | 696146 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789579 |
Product | hypothetical protein |
Protein accession | YP_001326334 |
Protein GI | 150395867 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.254759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.394325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGG ACGCTCCGAG CCCGATGAAG GGGATGGTGC TCAAGGTGCT CTCCGTTGTC GTCTTCGTGT GCATGTCAAC CTCTATCAAG GCTGCCGGCA ACGATATCGC CACGGGTCAG ATCACCTTCT ATCGCTCGGC ATTCGCGATG GTGCCGATCC TCGGCTTCCT GGCCTGCCGA GGCGCGCTGC GCGACGCTTT CCGGACCAGC AACGTCACGG GACATGTGGC GCGTGGCTTC GTCGGCATCC TCGCCATGAG TTGCGGCTTT TACGGTCTCG TCCATCTGCC CCTGCCGGAG GCGATCGCGA TCGGCTACGC TATGCCGCTT CTCGCGGTGG CTTTCGCGGC GATCTTTCTT GGAGAGATCG TGCGGCTCTA TCGCTGGTCG GCCGTGCTTA TCGGGCTCAT CGGGGTGTTT ATCATCATCT GGCCACGGCT TACGCTTTTC AACCAGGGCG GCTTCGGGTC GGCGGAGGCT ATGGGTGCCG TCGCGGTGCT TTTTTCGGCG GCGCTCGGAG CAACGGCGAT GGTGCTCGTG CGCAAGCTCG TACAGAAGGA ACGCACCCAT ACGATCGTCC TCTATTTCTC GCTTTCCGCT GCAATGTTCT CGCTTGCGAC GCTGCCCTTC GGCTGGTCTG AACTCTCATG GGAGGCATTC TTCCTCCTGA TGATCGCCGG GTTTTGCGGC GGCATCGGGC AGATCCTGCT GACGGAGAGT TATCGCCACG CCGATATGTC GACGATCGCC CCCTTCGAAT ACACATCCAT CGTGCTGGGC ATCGTCATCG GTTATTTTCT TTTCGGAGAT GTGCCGACGG CAACCATGCT CGCGGGAACG GCGATCGTCG TCGGCGCGGG CATCTTCATC ATCTACCGGG AGCACCAGCT GGGACTGGAG CGCAGGGGTG CCAGGAAGCA CGTTACCCCG CAGGGTTGA
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Protein sequence | MDADAPSPMK GMVLKVLSVV VFVCMSTSIK AAGNDIATGQ ITFYRSAFAM VPILGFLACR GALRDAFRTS NVTGHVARGF VGILAMSCGF YGLVHLPLPE AIAIGYAMPL LAVAFAAIFL GEIVRLYRWS AVLIGLIGVF IIIWPRLTLF NQGGFGSAEA MGAVAVLFSA ALGATAMVLV RKLVQKERTH TIVLYFSLSA AMFSLATLPF GWSELSWEAF FLLMIAGFCG GIGQILLTES YRHADMSTIA PFEYTSIVLG IVIGYFLFGD VPTATMLAGT AIVVGAGIFI IYREHQLGLE RRGARKHVTP QG
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