Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0631 |
Symbol | |
ID | 5321467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 676148 |
End bp | 677533 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789567 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001326322 |
Protein GI | 150395855 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.112663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTA GATCCCTTAC TGCCCGTGTT CTGGCGGTTT CGACCGTTTG GGCAGTCGTT GCCCTGGTGG TGATCGGCAT CGTCATTTCC GCCCTTTACC GGCAGGGATC CGAACGCGGC TTCCAGGACC TGCTGCGAGC GCAGCTCTAT AATGTCATCA ATTCGATCTC TGTCGACGAC AAGGCAGCGC TCTCAGGGAG CCCGCAGCTC GGCGACCTGC GCTTTTCCCA GCCGCAGACC GGGTGGTACT GGATCGTCGA GCCGATCGGC GAGTTCGATA CGCCGCCGCT GATTTCGACT TCGCTCGGAA CTGCGAAACT CCCAATCGTC AGCGTTGACG AGGTCCCCTT CGACATCCGC TACGAGCGGT TCTACACCAC GACGGATCCG TTCGGGAACG AGGTCGAAGT CGCCGAAACC GAGGTCGTCC TCGATATCCA GGGTCACGCC GCCCGTTTTC GGATCGCCGG AAATCGCGAG GTGCTGGAGG CGGACATCGA CCGCTTCACG CGTAATCTCA CGATCGCCTT GTCGATTTTC GGCCTTGGCG GCCTCGGCAT GAACGCGCTG ACCATCCTCT TCGGCCTGAA GCCGCTCGAC CAGGTACGCC GCTCGCTCGA AAAGATCCGC ACGGGCGAAA GCGAGCGGCT GGATGGGGCT TTCCCGCGGG AGATCCAGCC CCTTGCCAAC GAAGTGAACG CGCTGATCGA CAGCAATCGG CGCATCGTCG AGCGGGCGCG TATGCAGGTC GGCAATCTGG CCCACTCGCT CAAGACACCC ATTGCGGTTC TGCTCAACGA GGCGAGGGTG CTGGAGGTGC CGCACGGAGA ACTGGTCAGG GCGCAGGCCG ATGCCATGCA GACCCAGGTA CAATCCTATC TAAGCCGTGC CAGGATCGCG GCCCAGCGCG GGTCGGTGCT TGCGAGGACC GAAGCCCAAC CGGCGCTCGA GAGGATCATG CGGGTGATGC GGCGGCTCAA CCCCGACAAG CAATTCAGTC TTTCGATCAA TCCGCCTGGA CTGGTTCTGG CGATGGAGCA GCAGGACGTC GAGGAAACAG TCGGCAACCT GCTGGAAAAT GCCGCCCGAT ACGCGCAGGA CAGTATCTGG ATGACTGTCG AGCCCGCCCC CGAAGACGCA CGCGGGAAGG AGCCTGGCCG CCAGTGGATC GTCCTGCAGA TCGACGATGA CGGGCCGGGG CTCGACCCGG ATCAGATTGC AGTGGCGATG AAGCGCGGCA AGCGGCTCGA CGAGAGCAAG CCCGGAACCG GGCTCGGCCT TTCCATCGTG AGCGAGATCG TCGGAGAATA TCAGGGCAGT GTCGCGCTCA GCCGACGCGA TGAGGGAGGA TTGCGGGCCA CGCTCTTTCT CCCGGCTGCG ATCTGA
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Protein sequence | MAIRSLTARV LAVSTVWAVV ALVVIGIVIS ALYRQGSERG FQDLLRAQLY NVINSISVDD KAALSGSPQL GDLRFSQPQT GWYWIVEPIG EFDTPPLIST SLGTAKLPIV SVDEVPFDIR YERFYTTTDP FGNEVEVAET EVVLDIQGHA ARFRIAGNRE VLEADIDRFT RNLTIALSIF GLGGLGMNAL TILFGLKPLD QVRRSLEKIR TGESERLDGA FPREIQPLAN EVNALIDSNR RIVERARMQV GNLAHSLKTP IAVLLNEARV LEVPHGELVR AQADAMQTQV QSYLSRARIA AQRGSVLART EAQPALERIM RVMRRLNPDK QFSLSINPPG LVLAMEQQDV EETVGNLLEN AARYAQDSIW MTVEPAPEDA RGKEPGRQWI VLQIDDDGPG LDPDQIAVAM KRGKRLDESK PGTGLGLSIV SEIVGEYQGS VALSRRDEGG LRATLFLPAA I
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