Gene Smed_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0559 
Symbol 
ID5321395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp606893 
End bp607669 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID640789495 
Productadenylylsulfate reductase, thioredoxin dependent 
Protein accessionYP_001326250 
Protein GI150395783 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.639085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.636529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC AATCCCTCAA AGCAGAAGTG GCGGCCTTCG AAGCCGAAGC AAAGGTCCTG 
AACGACAGGC TCGCGGATCT GGATCTTGCC GGACGGCTGG CGCTCGTGGC CGGGCTCGCA
GGCCGTGCGG TCTTCACCAC CTCGCTCGGC ATAGAGGACC AGGTCATTAC CGCCGCGATC
GGCGGCGATC ATCTCGACAT TCAAGTTGCG ACGTTGAAGA CGGGCCGCCT CTTCAACGAG
ACAGTGGCCC TGATCGACAA GACCGAGGAA ACCTATGGTA TCCTCATCAA GCGCTATTAT
CCCGAAAAAG CCGACATCGA CGCCTATGTG GCGCAACACG GCATGAACGG TTTTTACGAA
AGCGTCGAAG CCCGGCATGC CTGTTGCGGC GTGCGCAAGC TGAAGCCGCT TGCGCGCGCG
CTCGACGGGG CAAGCTACTG GATCACGGGC CTGCGCCGCG GGCAGTCGGG CAACCGTGCC
ACGACCCCTT TCGCCGAAGC CGATGCTGAG CGCGGGCTCA TCAAGATCAA TCCGCTCGCC
GACTGGGACA TCGAGACGAT CCAGGCCCAT GTCGCGGCGG AGGGCATTCC CGTCAATCCG
CTGCACAGTC GCGGTTATCC GTCGATCGGT TGCGAGCCCT GCACCCGTGC CATCAAGCCC
GGCGAGCCGG AGCGCGCCGG ACGCTGGTGG TGGGAGAACG ACGAGAAGCG CGAATGCGGC
CTGCACGTTC CGGAAGCGGC TTCCTCGATC ATTCCGAATG CCAGCAACGC GGCCTGA
 
Protein sequence
MTTQSLKAEV AAFEAEAKVL NDRLADLDLA GRLALVAGLA GRAVFTTSLG IEDQVITAAI 
GGDHLDIQVA TLKTGRLFNE TVALIDKTEE TYGILIKRYY PEKADIDAYV AQHGMNGFYE
SVEARHACCG VRKLKPLARA LDGASYWITG LRRGQSGNRA TTPFAEADAE RGLIKINPLA
DWDIETIQAH VAAEGIPVNP LHSRGYPSIG CEPCTRAIKP GEPERAGRWW WENDEKRECG
LHVPEAASSI IPNASNAA