Gene Smed_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0544 
Symbol 
ID5321378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp587706 
End bp588212 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID640789478 
Producthypothetical protein 
Protein accessionYP_001326235 
Protein GI150395768 
COG category[S] Function unknown 
COG ID[COG5389] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.21317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.547637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAG GAAAGTCCCG CCGGGGCGTC GTTCAGATCA GCGAAGTCGC CAATGGCCTG 
ATTGATCCGG TGCTGGCGAA GCGTGCCGGC ATCAATACGA TGCTGCTCGG TTCGTGGGAC
GAGATCGCGG GATCGGAATT TGCCGATTGC ACCCGGCCGG AGAAGATTGC CTGGCCGCGT
CGCGCTTCCG AAATGACCGG CGAAGGCGGC CATCAACCGG GTGTGCTGAC GGTGGCCTGC
GAGGGCGCCC GGGCGCTTTT CCTGACGCAT GCTCAAGGCG AACTTATCCA GCGGATCAAC
GGGTTCTTCG GCTTCCATGC GATCGGTCAG CTGCGCATCG TGCAGAAGCC GGTCGCGCCG
CCTCCCAAGC GCTACAGTCG ACCGAAACCG CTGGTCGGGG AAGCTGCCCG GCGGCTGGAA
ACCATGATGG AGGGCGTCGA GAGCGAGGCT TTGAAGGCGG CGTTGAAGCG GCTCGGGACG
GCCGTTCTGT CGCCAAAACG ACGCTGA
 
Protein sequence
MSEGKSRRGV VQISEVANGL IDPVLAKRAG INTMLLGSWD EIAGSEFADC TRPEKIAWPR 
RASEMTGEGG HQPGVLTVAC EGARALFLTH AQGELIQRIN GFFGFHAIGQ LRIVQKPVAP
PPKRYSRPKP LVGEAARRLE TMMEGVESEA LKAALKRLGT AVLSPKRR