| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0539 |
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| Symbol | |
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| ID | 5321373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 582755 |
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| End bp | 583450 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789473 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001326230 |
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| Protein GI | 150395763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.598939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.598645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTA TCGACCTCAT CATCTTCGAT TGCGACGGCG TGCTCGTCGA CTCGGAAATC
ATCGCCTCGG AAGTCGAGGC CGCATTGCTG ACGGAGGCGG GCTATCCGAT CAGCATCGAG
GAAATGTCAG AACGCTTTTC CGGCATGACC TGGCGCGACA CATTGCTAGC GGTCGAAAAG
GAAGCGAGCA TTCCTCTTTC CGCGTCGCTG ATCGACAAGG TGGACGCCAT TCTCGACATG
CGCCTCGCCC GCGACGTCAA GATCATCGAA GGCGTGCGGC CGGCGCTCAT GCAATTGACG
CTTCCGCATT GCGTCTGCTC GAACTCCACC TCCGAACGGC TTGCGATGAT GCTCGGCAAG
GTCGGCATCA AGGATCATTT CGGCAAGCAT ATCTACTCCG CGCGCGACCT TGGCCCGGAT
CGCGTCAAGC CAAAGCCGGA CATTTTCCTG CACGGGGCAG CCCAGTTCGG CATCGATCCG
GAACGCGTTC TGGTCATAGA AGATTCGGTT CACGGTGTTC ATGGCGCCCG GGCCGCGGGA
ATGCGCGTCG TCGGCTTCAC CGGCGGTTCG CATACGTTTG CAGCCCATGC GGACAATCTG
ACGGAAGCCG GCGCCGAGAC GGTCATCTCG CGAATGGCGG CGCTTACCGG CGTGATTGCC
GCACTTGGGG AATGGTCGGA ATCGATGACG GCCTGA
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| Protein sequence | MTGIDLIIFD CDGVLVDSEI IASEVEAALL TEAGYPISIE EMSERFSGMT WRDTLLAVEK
EASIPLSASL IDKVDAILDM RLARDVKIIE GVRPALMQLT LPHCVCSNST SERLAMMLGK
VGIKDHFGKH IYSARDLGPD RVKPKPDIFL HGAAQFGIDP ERVLVIEDSV HGVHGARAAG
MRVVGFTGGS HTFAAHADNL TEAGAETVIS RMAALTGVIA ALGEWSESMT A
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