| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0461 |
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| Symbol | |
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| ID | 5321295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 497790 |
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| End bp | 498656 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789396 |
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| Product | peptidase S49 |
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| Protein accession | YP_001326153 |
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| Protein GI | 150395686 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.361729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGT TCTTGAGAAA GCTAATGCCG AGGCGCTTCC GCAGGGATGG AGTGACGATC
CCGGCGATCA GGCTGCATGG CGCAATAATG GCAGGCGGCA GTCCTCTCCG TCCGGTTCTC
AATCTCGCAA CCGTTGCGCC GCTGCTCGAA AAGGCATTCT CCGTCAAAGA CGCTCCTGCC
GTCGCCATCT CCATCAACTC TCCTGGCGGT TCGCCGGTGC AGTCCCGGCT GATTTATCAG
CGCATCCGGG ATCTCGCACA GGAAAAGAGG AAGCGCGTGC TGATCTTCGT CGAGGACGTG
GCAGCATCCG GCGGCTACAT GATCGCACTG GCGGGCGACG AGATCATCGC CGATCCGACC
TCGATCGTCG GTTCGATCGG CGTCGTTTCG GGCGGCTTCG GTTTTCCCGA TCTTCTCAAA
AAGATCGGCG TGGAAAGACG CGTCTATACG GCCGGGGAAA ACAAAGTGCT TCTCGATCCT
TTCCAGCCGG AGAAGGAGCG CGACATCGAG TTTCTCAAAG GCCTCCAGCT CGAAATCCAC
GACATCTTCA TCCAGATGGT AAAGAGCAGG CGCGGCTCGC TCCTGGCCGA TCATCCGGAC
CTCTTCTCGG GGTTGTTCTG GACGGGACAG CGCGGCCAGG AACTTGGCCT CGTCGATTCC
CTCGGCGATA TGCGGAGCGA GGTCAGGAAG CGCTATGGGG AAAAGGCGCG GCTCGAGCTG
ATCCAGCCGG CGCGGAGCCT TTTCGGGCGG CGCCAGCCTG GAGCGGCCGT GGCCGGAGCC
ATTGCCGCAC CTCTCGTCGC CTCGGCGGCC GCAGGTCTCG TCGATACCTT AGAGGAGAGG
GCGCTCTGGG CCCGTTTCGG ACTTTGA
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| Protein sequence | MAGFLRKLMP RRFRRDGVTI PAIRLHGAIM AGGSPLRPVL NLATVAPLLE KAFSVKDAPA
VAISINSPGG SPVQSRLIYQ RIRDLAQEKR KRVLIFVEDV AASGGYMIAL AGDEIIADPT
SIVGSIGVVS GGFGFPDLLK KIGVERRVYT AGENKVLLDP FQPEKERDIE FLKGLQLEIH
DIFIQMVKSR RGSLLADHPD LFSGLFWTGQ RGQELGLVDS LGDMRSEVRK RYGEKARLEL
IQPARSLFGR RQPGAAVAGA IAAPLVASAA AGLVDTLEER ALWARFGL
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