Gene Smed_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0460 
Symbol 
ID5321294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp496940 
End bp497710 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID640789395 
Productmethyltransferase small 
Protein accessionYP_001326152 
Protein GI150395685 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.672041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.644692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAA TTCCGGAGAC GGTGGATGCT TTCCACCGCG GCAGGTTCCA CCTGATCCAG 
CCGCTTGGTC AGGGGCACCG TTCGGGCATG GATGCGATGC TGTTGGCATC GCTCGTCTCC
TGCCGCAGCC GATGTCACGT CGCGGATCTC GGCGCCGGCG CCGGGGCCGC CGGCATGGCC
GTGGCTTCGC GGATAGAAGC GGCGCAGGTG CTGCTGGTCG AGCGCTCGGA GGTGATGGCG
GATTTCGCGC GGCGGAGCCT TGCTTTGTCC GAAAATGCGC ATTTTGCCGG CCGCGTTTCG
GTGCTGGAAG CCGACGTCAC TCTGAGCGGA AAGGCGCGCG TGGCCGCCGG TCTTCCCGAC
GACACCTTCG ATCACGTGAT CATGAACCCG CCCTTCAACG ATGCCGCCGA CCGCAGGACG
CCCGACAGGC TCAAGGCCGA AGCCCACGCC AGGAGCGCCG ATCTGTTCGA GACGTGGATC
AAGACGGCCG GGGCGATCAT GAAGCCAGGA GGACAACTTT CTCTGATCGC CCGACCGGAA
TCGATTGCCG AAATCGTCGT GGCCTGCGGC CGCCGTTTCG GGGGGATCGA GATCACCCCG
CTTCTGCCGC GGGCGGGCGA CGATGCCGTG CGCATTCTCG TTTCCGCAAT CAAGCAGAGC
CGGAAACGGC TGACGCTGCG CGCGCCGCTT GTCATGCATG GCGAGGGACA CCGCTTTTCG
GCTGACGTCG ACGATCTCAA CAATGGCCGC GCGGCCTATC ATCGCAGGTG A
 
Protein sequence
MTGIPETVDA FHRGRFHLIQ PLGQGHRSGM DAMLLASLVS CRSRCHVADL GAGAGAAGMA 
VASRIEAAQV LLVERSEVMA DFARRSLALS ENAHFAGRVS VLEADVTLSG KARVAAGLPD
DTFDHVIMNP PFNDAADRRT PDRLKAEAHA RSADLFETWI KTAGAIMKPG GQLSLIARPE
SIAEIVVACG RRFGGIEITP LLPRAGDDAV RILVSAIKQS RKRLTLRAPL VMHGEGHRFS
ADVDDLNNGR AAYHRR