Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0444 |
Symbol | |
ID | 5321278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 481216 |
End bp | 483108 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789379 |
Product | K potassium transporter |
Protein accession | YP_001326136 |
Protein GI | 150395669 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0753432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAT TGTCTGCTCC CGGGGCGGAG AACACCCGCC GCCTGCTTGC CATGGCTCTC GGATCCGTAG GCGTCGTCTA TGGCGATATC GGCACCAGCC CGCTCTACGC TTTTCGCGAA GCCTTGCGAC CCGTCTCGCA TGACGGTGTG ACGGACGTCG AGATCGTTGG CTTGATCTCG CTGATGATCT GGGCGCTCAC GATCATCGTC ACCATAAAAT ACGTGCTTTT CCTGCTGCGG GCGGACAACC AGGGCGAGGG AGGGACGCTT TCCCTGTTGG CGCTGCTCAT GAAGACGGCC AATGGCCACA CGGCGATCCT GTTCTTCATG GGCATTGCCG GCGCGGCGCT CTTCATCGGT GACGCGATGA TCACGCCGGC GCTGTCGGTG CTCTCGGCCG TCGAGGGGCT GAAACTGGTG ACGCCCGCCC TTTCGGACTA CGTCGTTCCA ATCGCGGTCG TAATTCTCCT GTTTCTTTTT GCCGTTCAGT CGAAGGGGAC CGCCGCGGTC TCGAAGTTCT TCGGGCCGAT CACCCTCGTG TGGTTTCTGG TGATGGGTGC TGTCGGCTTC ATGCACATTG CCGATGATCT GTCGATTTTC AGAGCCTTCA ACCCTTACTA TGCCGTCGCT TTCCTTTTCA ATGAAGGATA TGTCGGCATC GTCGTACTCG GCGCCGTCTT TCTGACGGTT ACGGGGGCAG AGGCGCTCTA CGCCGATCTC GGCCATTTCG GCCGCAGGCC GATCCAGTGG GCCTGGTTCA CCGTCGTCTT CCCCGCGCTC ACGCTGAACT ACCTGGGGCA GGGCGCGTTC GTCCTCAAGA ACCCCGAAGC GATGTCAGAT CCTTTCTTTC TGATGTTTCC CAAATGGGCG CTGCTGCCGG CCGTCATTCT TGCGACGGCA GCGACGATTA TCGCCAGCCA AGCCGTGATC ACCGGTGCCT TTTCGCTCAC GCGTCAGGCG ATCCACCTCG GCTTCCTGCC GCGAATGGCG ATTTTCCATA CATCCGAGAC GCATACCGGC CAGATCTACC TGCCCAACGT CAACACGCTG CTGATGTTCG GCGTCATGGC GCTCGTCTTC ATTTTCGGAT CGTCCGAGTC CCTCGCGACC GCATACGGCA TTTCGGTGAC TGGCGCGATG GTGGTTACCA CCGTCCTGGC CTTCGAATTC CTGCGCATGC GTTGGAACTG GCCTGCCTGG TGGGCGGCCG GCGTGCTGCT GCCGCTGTTC GCGCTGGAAC TCGTCTTCCT GGGCGCGAAC ATGCTGAAGA TCCACGATGG CGGCTACGTT CCGATCCTGA TCGCGGCGAC CTTCATCGTC ATCATGTGGA CCTGGAAGCG CGGCACCGCA ATTCTGCACA CAAAGACCCG CCACATCGAC ATTCCACTCG AACGCTTCAT CAAATCCATC GAGCGCCAGA GCGAGCATGC ACCGGTATCG GTCCCCGGCA CGGCGATCTT CCTCACCAGC GATCCGGAAT CGACGCCCGC CGCGCTTCTG CACAACATCA AGCACAATCA CGTTCTGCAT CAGCAGAATT TCATCCTGAC GATCCGGACC GCAAACACGC CGAAGGTACC CAGGGAAGAG CGGGTAAGCG CCCGGCGGCT ATCGGAGCGT TTCACCCTGA TGGAAGTGAG GTTCGGCTTC ATGGAGACGC AGAACGTCTC ACAGGCTCTT GGCCTTTTCC GAAAATCCGG CCTGAAGTTC GATATCATGT CGACCTCTTT CTATCTGGGC CGCCGCAAAC TCGTGCCGGA CGCCCAGTCC GGCATGCCGC ATTGGCAGGA CCGCCTGTTC ATCGCCCTTG CAAACGCCGC AATCGACCCC TCGGACTATT TCCGCCTGCC GACGAACCGG GTGGTTGAAC TGGGCTCTCA CGTCATCATC TGA
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Protein sequence | MSQLSAPGAE NTRRLLAMAL GSVGVVYGDI GTSPLYAFRE ALRPVSHDGV TDVEIVGLIS LMIWALTIIV TIKYVLFLLR ADNQGEGGTL SLLALLMKTA NGHTAILFFM GIAGAALFIG DAMITPALSV LSAVEGLKLV TPALSDYVVP IAVVILLFLF AVQSKGTAAV SKFFGPITLV WFLVMGAVGF MHIADDLSIF RAFNPYYAVA FLFNEGYVGI VVLGAVFLTV TGAEALYADL GHFGRRPIQW AWFTVVFPAL TLNYLGQGAF VLKNPEAMSD PFFLMFPKWA LLPAVILATA ATIIASQAVI TGAFSLTRQA IHLGFLPRMA IFHTSETHTG QIYLPNVNTL LMFGVMALVF IFGSSESLAT AYGISVTGAM VVTTVLAFEF LRMRWNWPAW WAAGVLLPLF ALELVFLGAN MLKIHDGGYV PILIAATFIV IMWTWKRGTA ILHTKTRHID IPLERFIKSI ERQSEHAPVS VPGTAIFLTS DPESTPAALL HNIKHNHVLH QQNFILTIRT ANTPKVPREE RVSARRLSER FTLMEVRFGF METQNVSQAL GLFRKSGLKF DIMSTSFYLG RRKLVPDAQS GMPHWQDRLF IALANAAIDP SDYFRLPTNR VVELGSHVII
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