| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0408 |
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| Symbol | groEL |
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| ID | 5321242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 438560 |
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| End bp | 440197 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789343 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001326100 |
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| Protein GI | 150395633 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.522888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTA AAGAAGTCAA GTTCGGCCGT AGCGCGCGCG AAAAGATGCT GCGCGGCGTC
GACATTCTCG CCGACGCGGT CAAGGTGACG CTCGGCCCGA AGGGCCGTAA CGTCGTCATC
GACAAATCGT TCGGCGCACC GCGCATCACC AAGGACGGCG TTTCCGTCGC CAAGGAGATC
GAACTCGAAG ACAAGTTCGA GAACATGGGC GCCCAGATGG TCCGCGAAGT TGCTTCGAAG
ACCAACGACA TCGCCGGCGA CGGCACGACG ACCGCAACCG TTCTCGCTCA GGCAATCGTT
CGCGAAGGCG CGAAGGCCGT TGCCGCCGGC ATGAACCCGA TGGACCTTAA GCGCGGTATC
GACCTCGCCG TCGCTGAAGT CGTCAAGGAC CTGCTCGCCA AGGCCAAGAA GATCAACACC
TCGGACGAAG TCGCCCAGGT CGGCACGATC TCGGCAAACG GCGAAAAGCA GATCGGTCTC
GACATCGCCG AAGCGATGCA GAAGGTTGGC AACGAAGGCG TCATCACGGT TGAAGAAGCC
AAGACCGCCG AGACCGAACT CGAAGTCGTC GAAGGCATGC AGTTCGACCG CGGTTATCTG
TCGCCCTACT TCGTCACCAA CCCGGAAAAG ATGGTCGCCG ACCTCGAAGA CGCTTACATT
CTCCTGCACG AGAAGAAGCT CTCCAACCTT CAGGCGATGC TCCCGGTTCT CGAAGCCGTC
GTCCAGACCG GCAAGCCGCT CCTCATCATT GCTGAAGACG TCGAAGGCGA AGCTCTTGCA
ACGCTCGTCG TCAACAAGCT GCGTGGCGGC CTGAAGATTG CTGCCGTCAA GGCTCCGGGC
TTCGGCGACC GTCGCAAGGC CATGCTCGAA GACATCGCCA TCCTGACGGG CGGCACCGTG
ATCTCGGAAG ACCTCGGCAT CAAGCTCGAA AGCGTCACGC TCGACATGCT CGGCCGTGCG
AAGAAGGTTT CGATCACCAA GGAAAATACG ACGATCGTCG ACGGTGCCGG CCAGAAGTCC
GACATCGAAG GCCGCGTCGC CCAGATCAAG GCCCAGATCG AAGAAACCAC TTCCGACTAC
GACCGTGAGA AGCTGCAGGA GCGCCTTGCC AAGCTCGCTG GCGGCGTTGC CGTCATCCGC
GTCGGCGGTG CGACGGAAGT CGAAGTGAAG GAAAAGAAGG ACCGCATCGA CGACGCTCTC
AACGCGACGC GCGCTGCAGT TCAGGAAGGC ATCGTACCGG GCGGCGGCGT TGCTCTGCTG
CGTTCCTCCG TCAAGATCAC CGTCAAGGGT GAAAACGACG ACCAGGATGC CGGCGTCAAC
ATCGTTCGCC GCGCTCTGCA GTCTCCGGCC CGCCAGATCG TCGAAAACGC TGGCGACGAA
GCATCCATCG TTGTCGGCAA GATCCTCGAG AAGGACACCG ACGACTTCGG TTACAACGCA
CAGACCGGCG AATATGGTGA CATGATCGCC ATGGGCATCA TCGACCCGGT CAAGGTCGTT
CGCACCGCGC TTCAGGACGC AGCCTCGGTT GCTTCGCTGC TCATCACCAC CGAAGCCATG
ATCGCCGAGC TGCCGAAGAA GGACGCTCCG GCAATGCCTG GCGGCATGGG CGGCATGGGC
GGCATGGACA TGATGTGA
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| Protein sequence | MAAKEVKFGR SAREKMLRGV DILADAVKVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI
ELEDKFENMG AQMVREVASK TNDIAGDGTT TATVLAQAIV REGAKAVAAG MNPMDLKRGI
DLAVAEVVKD LLAKAKKINT SDEVAQVGTI SANGEKQIGL DIAEAMQKVG NEGVITVEEA
KTAETELEVV EGMQFDRGYL SPYFVTNPEK MVADLEDAYI LLHEKKLSNL QAMLPVLEAV
VQTGKPLLII AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAMLE DIAILTGGTV
ISEDLGIKLE SVTLDMLGRA KKVSITKENT TIVDGAGQKS DIEGRVAQIK AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGATEVEVK EKKDRIDDAL NATRAAVQEG IVPGGGVALL
RSSVKITVKG ENDDQDAGVN IVRRALQSPA RQIVENAGDE ASIVVGKILE KDTDDFGYNA
QTGEYGDMIA MGIIDPVKVV RTALQDAASV ASLLITTEAM IAELPKKDAP AMPGGMGGMG
GMDMM
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