Gene Smed_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0401 
Symbol 
ID5321235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp431188 
End bp431568 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content59% 
IMG OID640789336 
Producthypothetical protein 
Protein accessionYP_001326093 
Protein GI150395626 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0681518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTCA AATTCTTGAC GGCCGCCCTT CTGCTGGCCT CATCCGCTGC TCCCGCGCTC 
TCGCAGGAGA CCGACCACGG CAACATGCAT CACGGGTCCG TGGAAAGTGG CGCGTCGGCT
GCCACATCAC CGTCGAGCAA AGCCTTTGCG GAGGCGAATG CCAAAATGCA CAAGGATATG
GACATCGTCT TCAGCGGCAA TACCGATGTC GACTTCGTGC GCGGCATGAT CGCTCACCAT
CAGGGGGCAA TCGACATGGC CAGGGTCGAA CTCCAACACG GCAAGGATGA AACGATCCGC
AAACTGGCGG AAGACATCAT CGCGGCGCAG GAAAGCGAGA TCAAGATGAT GAAGGAGTGG
CTGGCAAGGA ACGGCGGCTA A
 
Protein sequence
MFLKFLTAAL LLASSAAPAL SQETDHGNMH HGSVESGASA ATSPSSKAFA EANAKMHKDM 
DIVFSGNTDV DFVRGMIAHH QGAIDMARVE LQHGKDETIR KLAEDIIAAQ ESEIKMMKEW
LARNGG