Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0343 |
Symbol | |
ID | 5321176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 370334 |
End bp | 371293 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789278 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001326036 |
Protein GI | 150395569 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.158898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.129182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAGG CTATTGCGAG ACTTTCTATC CTGCTTGCCG CCACGGCGAT TTCGGCAACC GCCGCCTCGG CCTCGGACGA TATCAGCGTG TCGCTTGTGC TCGGCCAGCG CAATAGCGGG TTTCATGAGG CGATCGCCTG CGGCGCCCGC GCCGCCGCCA AGGAACTGGG CGTGAAGGTC AACATCCAGG CCGCACCGAC CTACTCGGCC TCCGAGCAGA TCCCGGTGCT GAACGCCGTC ATGGCGACGA GCCCTTCTGC CATCGTGCTC GATCCGACGA GCTCGACCGC GCTGATCGCG CCACTGATGG AGGCAGCCGC CAACGGCGCC AAGATCGTCG CCGTCGACAC CACGCTCGAC GACCCGTCGG TGCTCTCCGC CGTGGTCGGA ACCGACAATG AAAGCGTCGG CCGCGAAACC GCCAAGGCGC TCGCGAAGGC ACTCGACGGA AAGTCCGGCA AGGTGGCGCA GATCAACAGC ATTCCCGGCA TTTCCACCGT CGATGCCCGG ATCAAGGGTT TCGAAGAAGA GATCAAGAAG TATCCGAATC TCACCTATAT CGGCAACCAG TTTGCAAGTG AGGATATCCC GAAGGCACAG CAGGCCTACG TGTCGCTCAT GAGCGCCAAC CCCGACCTCA TCGGCGTCGT CTCCCAATCG AACAATCCCG CGATCGGCGT TGCCGGCGGC ATCCGTTCCA CCGAGACGGC CGAGAGCGTC GTCGCTATTG CGGTGGATGC CGATGAAGCC GAGATCGAGG CTCTGAATGA GGGGCTGCTC GACGCTCTCG TCATCCAGCA GCCCTACGAA ATGGGCTATG TCGGCTTCAA GCAGGCCGTC GCTGCCGTCA AGGGCGAGCC CGTCGAGACG CCGATCGGCA CCGGCACGGT AACCGCGACC AAGGCGAATA TTGCCGACCC GGACGTGGCC AAATACCTTT ACGAAGGGAA TTGCATCTGA
|
Protein sequence | MTKAIARLSI LLAATAISAT AASASDDISV SLVLGQRNSG FHEAIACGAR AAAKELGVKV NIQAAPTYSA SEQIPVLNAV MATSPSAIVL DPTSSTALIA PLMEAAANGA KIVAVDTTLD DPSVLSAVVG TDNESVGRET AKALAKALDG KSGKVAQINS IPGISTVDAR IKGFEEEIKK YPNLTYIGNQ FASEDIPKAQ QAYVSLMSAN PDLIGVVSQS NNPAIGVAGG IRSTETAESV VAIAVDADEA EIEALNEGLL DALVIQQPYE MGYVGFKQAV AAVKGEPVET PIGTGTVTAT KANIADPDVA KYLYEGNCI
|
| |