Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0229 |
Symbol | |
ID | 5321061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 253875 |
End bp | 254189 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789164 |
Product | L-rhamnose 1-epimerase |
Protein accession | YP_001325923 |
Protein GI | 150395456 |
COG category | [S] Function unknown |
COG ID | [COG3254] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02625] L-rhamnose 1-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.187644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.116954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAT ACGCCTTCCG CATGCGACTC CATCCCGGCA AGGCCGCCGA ATACCAGGCG CGTCACGACG CGATCCGGCC GGAGCTGGTG GCGCTTCTGA AGGACGCCGG GATTTCCGAT TATTCGATCC ACCTCGATGA GGAGAACGAT CTGCTCTTCG GTGTGCTCTG GCGGTCCGAC GATCACAAGA TGGCCGATCT TCCTTCGCAC CCGGTGATGC GGAAATGGTG GGCGCATATG GCCGATATCA TGGAGACGCA TGCCGACAAC GAGCCGGTCG CCGCACCGCT CAAGACGGTC TTTCATCTGA GATGA
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Protein sequence | MEKYAFRMRL HPGKAAEYQA RHDAIRPELV ALLKDAGISD YSIHLDEEND LLFGVLWRSD DHKMADLPSH PVMRKWWAHM ADIMETHADN EPVAAPLKTV FHLR
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