Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0168 |
Symbol | |
ID | 5320998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 185971 |
End bp | 186999 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789101 |
Product | UDP-glucose 4-epimerase |
Protein accession | YP_001325862 |
Protein GI | 150395395 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.566405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAT TGGTGACGGG CGGGGCAGGC TATATCGGCA GCCACATGGT GTGGTCGCTC CTGGACGCCG GCGAAGCGGT GGTGGTGCTC GACTGTCTGT CGACCGGCTT CCGGTGGGCG GTCGCGCCGG AGCCGCGCTT CTATCTCGGC GACGCCGGTG ACCGGGCACT GCTCCAGCGG GTCTTTGCAG AGAACGACAT CGACTCCGTG GTTCATTTCG CCGGATCGGC CGTCGTACCG GAATCGGTCG CCAATCCGCT TGCCTATTAC GAGAACAACA CGGCCAATAC CCGCACGCTT GTTGCCGCAA CCATCGAGGC CGGCATTCGC CACTTCGTCT TTTCATCGAC GGCTGCCGTT TACGGGACGC AGGATACGCC CGATCCGGTC AGCGAGACGG CCGCTCCGCG GCCCCAGAGT CCTTATGGCC GATCCAAGTG GATGTCGGAG TTGATGCTGG CGGATGCGGC GGCCGCGCAT GATTTCCGTT TTGTCGCGTT GCGCTATTTC AATGTGGCCG GCGCGGATCC GCTTGGTCGC GCCGGTCAGT CGACGTTCGG CGCCACGCAT CTGATCAAGG TCGCCTGCGA AGCGGCGCTC GGCAAACGTC ACAAGGTCGA TGTCTTCGGC ATCGACTATC CGACGGCGGA CGGCACCGGT GTTCGAGACT ATATCCATGT GAGTGACCTT GTCGCGGCGC ACCGGAGCGC GCTCGCCTAT CTGCGGATGG GCGGCGAACC GCTCGTCACA AATTGCGGCT ACGGCCACGG CTTTTCGGTG CTGCAGGTGC TCGATACGGT ACGGCAGGTT TCCGGCCGCG ACTTCACGGT CGACTATGCG CCACGGCGCC CGGGTGATCC GGCGCAAGTG GTCGCCGATC CCTCCGTAGC GCGTCTGAAA CTCGACTGGG TTCCGACGCA TGCGAGCCTG GAACATATCG TCCAGAGCGC CTACGACTGG GAGGGCTATC TCAGCCGTAA GAACAGCTTC GACCGGGAAG GGGACGAGCG GTTGATCGCC AGAGGCTGA
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Protein sequence | MAVLVTGGAG YIGSHMVWSL LDAGEAVVVL DCLSTGFRWA VAPEPRFYLG DAGDRALLQR VFAENDIDSV VHFAGSAVVP ESVANPLAYY ENNTANTRTL VAATIEAGIR HFVFSSTAAV YGTQDTPDPV SETAAPRPQS PYGRSKWMSE LMLADAAAAH DFRFVALRYF NVAGADPLGR AGQSTFGATH LIKVACEAAL GKRHKVDVFG IDYPTADGTG VRDYIHVSDL VAAHRSALAY LRMGGEPLVT NCGYGHGFSV LQVLDTVRQV SGRDFTVDYA PRRPGDPAQV VADPSVARLK LDWVPTHASL EHIVQSAYDW EGYLSRKNSF DREGDERLIA RG
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