| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0102 |
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| Symbol | |
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| ID | 5320930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 113078 |
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| End bp | 114103 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789034 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001325797 |
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| Protein GI | 150395330 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0193785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CTGTTCTTTC TGCCGCATTC GGCGCGCTTG CACTCGGCGT GGCCTTCGCA
TCGCCTTCGC AGGCGGCCGA CGTGTCGGCC TGCCTCATCA CCAAAACCGA CGCCAATCCT
TTCTTTGCGA AAATGAAGGA AGGCGCGACC GCCAAGGCCA AGGAACTGGG CGTGGCCCTG
AAGTCCTATG CCGGTAAGAT CGATGGAGAT TCCGAGAGCC AGGTTGCCGC GATCGAGACA
TGCATCGCCG ACGGTGCGAA AGGTATTCTG ATCGCCGCCT CCGACACCCA GGGCATCGTG
CCTCACGTCA AGAAGGCGCG GGACGCCGGT CTCCTGGTCA TCGCACTCGA TACGCCGCTC
GAGCCGCTCG ACTCCGCCGA CGCGACCTTT GCAACGGACA ACCTGCTCGC CGGCAAGCTG
ATCGGGCAAT GGGCTGCCGC AACGCTCGGC GACGCCGCCA AGGACGCCAA GGTGGCATTC
CTCGACCTTA CGCCGTCTCA GCCTTCCGTC GACGTGCTGC GCGACCAGGG CTTCATGATC
GGCTTCGGCA TCGACCCCAA GGACCCGAAC AAGATCGGCG ACGAGGATGA TCCGCGCATC
GTCGGCCATG ACATCACCAA CGGCAACGAA GAAGGCGGCC GGTCTGCAAT GGAGAACCTC
CTCCAGAAAG ATCCGACCAT CAATGTCGTC CACACGATCA ACGAACCGGC GGCCGCCGGC
GCCTACGAGG CGCTGAAGGC TCTCGGCCGC GAGCAGGACG TGCTGATCGT TTCCGTCGAT
GGCGGTTGCC CGGGGGTCAA GAACGTCGCC GAGGGTGCAA TCGGAGCGAC GTCGCAGCAA
TACCCGCTGA TGATGGCGGC GCTCGGCATC GAGGCAATCA AGAAGTTCGC TGACACCGGC
GAAAAGCCGG TGCCGACAGA GGGCAAGGAT TTCGTGGACA CGGGAGTCTC GCTCGTCACC
GACAAGCCGG TTGATGGTCT GGAATCGATC GACACCAAGA CCGGCCTGGA GAAGTGCTGG
GGCTGA
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| Protein sequence | MKKTVLSAAF GALALGVAFA SPSQAADVSA CLITKTDANP FFAKMKEGAT AKAKELGVAL
KSYAGKIDGD SESQVAAIET CIADGAKGIL IAASDTQGIV PHVKKARDAG LLVIALDTPL
EPLDSADATF ATDNLLAGKL IGQWAAATLG DAAKDAKVAF LDLTPSQPSV DVLRDQGFMI
GFGIDPKDPN KIGDEDDPRI VGHDITNGNE EGGRSAMENL LQKDPTINVV HTINEPAAAG
AYEALKALGR EQDVLIVSVD GGCPGVKNVA EGAIGATSQQ YPLMMAALGI EAIKKFADTG
EKPVPTEGKD FVDTGVSLVT DKPVDGLESI DTKTGLEKCW G
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