| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0097 |
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| Symbol | |
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| ID | 5320925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 107735 |
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| End bp | 109642 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640789029 |
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| Product | putative Chase2 sensor protein |
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| Protein accession | YP_001325792 |
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| Protein GI | 150395325 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCG TTCTAGGGCG GCTGCGCATA GAACCCAGGC TGCTTTACCG CGTCACCCCG
CTCTGGGGCG GGGTCTTTGC CAGCCTCGCC GCGGCGGCGC TGCTTTTCTA TGCTGCAACC
ATCCTCGGCA CCCAGCGTGA ACTTTTCTTC GACAATCTGA CCCAATGGGT CCCTCCGCCA
AGGTCGCCGG ACATCATCGT CGTCGACGTC GATCGCGAGG CCTACGAAGC GAATGGCGGC
AGTTGGAACA GGGCCGCAAC CGCCGACCTC ATTTCGCGCC TGGCCGCGGC CGCGCCGAAA
ATGCTTGCCG TTGATTTCGT CTTCAGTTCC GCCTGCGATC CGGCTTCATC CGCCAACGCC
GCGCTTGCTG CGGCAATCGG CAAGGTGCCC GCAGCCCTCG GCTTCCTGGC GGCCGACCGC
GTTATCGAAC GGCCGCGCCC CGTCCCGCCC CTGGCCCGCA GGCGCCAGCT GGCCGTCCCA
GCGCAATGGT TCATTGAAGG GGCGGAGACC TCCTGCCCCG GCTTCATGGA CCGATCCGAG
GCCGCGACTG CGGCTTTTCT CGTCGGCGAC GAGGATGCGC GAGTCCGGCG CGTGCAGGCC
TTCGCCATCC TGGGCAATGA TGCCTACCCG TCCCTTGGTA TCGAAGCGGG CCGGCTTGCC
GCCGGCAGCA GCACGCCTGT TCTCGGCGGA GAGCCCGCCT GGTTGAGACT CGATCACGCG
ATCATCCCCC TCGACGAGAG CGGCAACCTG CGCTTCGCAG CAAGTTCTGA AGAGGCGATC
GCCGCGCGCA CGATCTCGGC CGCCGACGTT CTTGACGGAC GCGTCGACGA AAGTCATCTG
AAAGGAAGGG TAGTGTTGAT AGGCAGCAGC ATGCCGAGCC TCGGTGGCCT GCGGCCCACC
GCATCCATGC CGCTCCAGCC ATCTGTTCAG ATCCACGCCG ATGTCGCCAA TGCGATCATG
ACCGGCTTCG TGCCCTACCG CGGCAGCCAC CTGCCGCTTA TCGAAGCTGT CTTCAGTTTG
GCCGCGGGAG TCGCTGCCGC CTATGCGGCA ACCAGGCTCC GCCCGCAATC GTCCCTTATA
CTGGGGGCCG CGGCGGTGCT CGCCTTCATC ACCTTCTCCG GTGCGATCTA TGCCTCCACC
GGTTGGCTCT TCGACGCGGT CGGCACATCC TTGGCACTGA TCGCGGTCCT CGTCGTCACC
AGCGCATTAC AGCTCGCGCG CACGCTTCGC GCCGAGGCGG CCGCCCGGCG GAAATTCTCG
CAATACCTGC CGCAGTCCGT GGTGGCGCGC TACATAGACG GGCCCGATGG CGAACGCCTG
GCCGGTGAGG AACGTCCGGT AACGGCGCTC TTCACCGATA TCGAGGGTTT CTCGACGCTT
TCGCAAAAGC TTGGTCCCCG CGAACTTGTC GCCCTGCTCG ACATCTATTT CGCCGAGGTG
AACGCGCTCG TCTCCGGATA TGGTGGCATG GTCGACAAGG TCGTCGGCGA TGCCGTCCAT
GCTCTCTTCA ACGCTCCTGA GGACCTGCCC GGCCATGTAG ACCAGGCGAT CGACTGCGCC
ATGGCGATCC ATCTTCTTAC CGAGGAAATG CGCTGCCGCC CGCAATTCGC CGAACAGGGC
TTCGGCAGGA CCCGCATCGG CATCGAGACG GGCGCGGCGG TGCTGGGAGA AGTGGGCGCC
GGCGGGAAGC TCGACTATAC CGCCCACGGC GATGCGGTGA ATCTCGCTGC GCGCCTTCAG
GAGGCGAACA AGTTCCTCGG CACCGGCATC TGCATCGGCC CGGCAGCGGC CGCGCAGTCG
AAAGCGGCGC TAACGGCGCT TGGGCGGCAT GACATCAGGG GCTTCGGGCC GATCGAGCTT
TTCACGGTAG CGGGTGACGG ACTGAATAAG CACCTTCGAG CGGAATGA
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| Protein sequence | MRRVLGRLRI EPRLLYRVTP LWGGVFASLA AAALLFYAAT ILGTQRELFF DNLTQWVPPP
RSPDIIVVDV DREAYEANGG SWNRAATADL ISRLAAAAPK MLAVDFVFSS ACDPASSANA
ALAAAIGKVP AALGFLAADR VIERPRPVPP LARRRQLAVP AQWFIEGAET SCPGFMDRSE
AATAAFLVGD EDARVRRVQA FAILGNDAYP SLGIEAGRLA AGSSTPVLGG EPAWLRLDHA
IIPLDESGNL RFAASSEEAI AARTISAADV LDGRVDESHL KGRVVLIGSS MPSLGGLRPT
ASMPLQPSVQ IHADVANAIM TGFVPYRGSH LPLIEAVFSL AAGVAAAYAA TRLRPQSSLI
LGAAAVLAFI TFSGAIYAST GWLFDAVGTS LALIAVLVVT SALQLARTLR AEAAARRKFS
QYLPQSVVAR YIDGPDGERL AGEERPVTAL FTDIEGFSTL SQKLGPRELV ALLDIYFAEV
NALVSGYGGM VDKVVGDAVH ALFNAPEDLP GHVDQAIDCA MAIHLLTEEM RCRPQFAEQG
FGRTRIGIET GAAVLGEVGA GGKLDYTAHG DAVNLAARLQ EANKFLGTGI CIGPAAAAQS
KAALTALGRH DIRGFGPIEL FTVAGDGLNK HLRAE
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