Gene Smed_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0087 
Symbol 
ID5320915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp97770 
End bp98345 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content62% 
IMG OID640789019 
Productinvasion associated locus B family protein 
Protein accessionYP_001325782 
Protein GI150395315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGC AACTCGCCAC CGTGCTTCCC GTCGCGGCTT GCATGGTCCT GTCCGGCGGC 
GCTCCCGCCG TCGGGCAGGG TGCGACGCCG GAACCCCGCT ACTGGATCAA GCCGTCCGAG
GTCGCGATTC CGCCCGACGT GCCGATCGGC ATGTATCGCC GCCTCATCCG TCCTTTCGAG
AACTGGACTC TGATTTGTGA CGAGAATCTC AAGTCCAAAC AGAGAATCTG CAACGTGTCT
CAACTCGTCG TCGATAAGGC CGGCAACACT GTTTTCAGCT GGTCGCTGGC CGCAACCGCA
CAAGGCAAGC CGGTGATGAT CCTGCGCGTC CCCCCCGCGG CGGGAAAAGG TTCGATCATC
CGTCTGTCTT TCTCCGACCG AAAGGAGCCG GTCGAGGTGC GGGTGGAGAG CTGTGACTCC
GTTGTATGCC TGGGAACGGT ACCGGTAGGC CCGATCCTTC GCTCCCATAT CGCTCGGCAG
TCGACGGTCC GCCTGTCCTA TGGCGCCGAT CAGGGGGACG TCAGTTTCAA TCTGCCCTTC
CAAGGGCTGC CTCAGGCATT GGAGGCGATA GAGTAG
 
Protein sequence
MSRQLATVLP VAACMVLSGG APAVGQGATP EPRYWIKPSE VAIPPDVPIG MYRRLIRPFE 
NWTLICDENL KSKQRICNVS QLVVDKAGNT VFSWSLAATA QGKPVMILRV PPAAGKGSII
RLSFSDRKEP VEVRVESCDS VVCLGTVPVG PILRSHIARQ STVRLSYGAD QGDVSFNLPF
QGLPQALEAI E