Gene Smed_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0078 
SymbolengB 
ID5320905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp85776 
End bp86429 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID640789009 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_001325773 
Protein GI150395306 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGA CGAACAACCA GAATGCCGCA AGCGTCTTCG GCCGGCCTTG GATCTTCATC 
CGCGGCGTGC CCTCGATGAA GTTCCTGCCG CCGGAAGGGC CGACGGAGAT CGCCTTTGCC
GGCCGCTCCA ACGTCGGCAA GTCGTCCCTG ATCAACGCAC TCGTGGGCCA TAAAGGCCTT
GCACGCACAT CGAACACGCC GGGCCGCACT CAGGAACTCA ACTATTTCGT GCCGGACGGT
TATTCGGGAG AAGCCGACGA CCTGCCGCCG ATGGCGCTTG TGGATATGCC GGGCTACGGC
TATGCCCAGG CGCCCAAGGA ACAGGTCGAT GCCTGGACAA AGCTGGTGTT CGACTATCTG
CGCGGACGTT CCACGCTGAA GCGCGTCTAT GTGCTGATCG ACGCACGTCA CGGTATCAAG
AAGAACGACG AGGAGGTGCT GGCTCTCCTC GACAAGGCGG CGGTGTCCTA CCAGATCGTG
CTGACCAAGA CGGACAAGAT CAAGGCTGCC GGCGTGCCGA GGCTGCTCGC CGAAACGCTC
GAGAAGATCA GGAAGCGGCC GGCCGCTTTT CCCGAGGTGC TATCTACATC GTCGGAAAAG
GGCGAAGGCA TCGAGGAGCT CCGCGCGGCG ATCGAGCTTG CCGTGGCGCG CTGA
 
Protein sequence
MSATNNQNAA SVFGRPWIFI RGVPSMKFLP PEGPTEIAFA GRSNVGKSSL INALVGHKGL 
ARTSNTPGRT QELNYFVPDG YSGEADDLPP MALVDMPGYG YAQAPKEQVD AWTKLVFDYL
RGRSTLKRVY VLIDARHGIK KNDEEVLALL DKAAVSYQIV LTKTDKIKAA GVPRLLAETL
EKIRKRPAAF PEVLSTSSEK GEGIEELRAA IELAVAR