Gene Smed_0059 details

Gene Information

• Locus tag: Smed_0059
• ID: 5320886
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sinorhizobium medicae WSM419
• Kingdom: Bacteria
• Replicon accession: NC_009636
• Strand: +
• Start bp: 65391
• End bp: 65936
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640788990
• Product: hypothetical protein
• Protein accession: YP_001325754
• Protein GI: 150395287

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.913147
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.219232
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAGCAG GGGGAAATCT GTACAGACTC GATCCTTCCA GTGAAGGAGC GGGCCCCGAG 
GTGGCGTCGG GGGCCTATTA CGACCACATC AGGAAGATCA ACGACGTCTT TGCCGATCAG 
ATAAAGACGT CCGACCAGAA AGCGGCCTAT ATCTTCACTT TCATGTTCGC CTTTCTGGTT 
ACTTCGCAAG AAGGGCGCAG CGTCTTTGCC TGGCATCGCT ACATGGAGGC CAGCAGCATT 
TCGATGGTAT TCTCGGCTAT GCTGGCGCTT GCGTCTATCT TCTCGATCAT ATCGGCCATC 
CTCGTGGTGC TTCCCAGGAA GAGCGCAACC TCGACGACAT TGTTCTGGGG CGCCTGGTCC 
AAGCACCGCG ACAGCTTTAT CCGGGCGGCG GGAAGCGGCG ACCAAGCCTA TCTTTTCCGC 
CAATATGCCG AGAATGCGGA TGCGCTTGCT GCGATCGCCT GTGGAAAATA CCGCTGCGTC 
AGCTTCGCCT TCCGCGGGCT GCTCGTGACA GTGCTTTCCT TTATCTGTCT CCTCGCGGTG 
AAATAG 

 

Protein sequence

MEAGGNLYRL DPSSEGAGPE VASGAYYDHI RKINDVFADQ IKTSDQKAAY IFTFMFAFLV 
TSQEGRSVFA WHRYMEASSI SMVFSAMLAL ASIFSIISAI LVVLPRKSAT STTLFWGAWS 
KHRDSFIRAA GSGDQAYLFR QYAENADALA AIACGKYRCV SFAFRGLLVT VLSFICLLAV 
K