Gene Smed_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0038 
Symbol 
ID5320865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp39542 
End bp40045 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID640788969 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001325733 
Protein GI150395266 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000142621 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTTA CCGACTACTT CACCCGCCGC ACAGAATTCG ACATTTTCCC GCTTGAAGAG 
GCAGATCTGG GCGCCGCCGC GGCACTGCAC CGCCAGCGCT TTGCCTCTGC CTGGAGCGAC
GGCGAAATAC ACGGGTTGCT GAGCCAGGAG ACGGTATTCG GATTCGTTGC GCGCCAGACC
AATGCCAATG GAAGGTTCCG CCCCGCTTTC GGCGGCTTCG TGCTGTCGCG GGCGGTTGCC
GGCGAAGCCG AAATACTGAC GATCGGGGTC GATGCGCGAT TTTCGCGTTC CGGTCTGGGT
TGGCGCCTGA TGCAGGCGGC GATGCGGGAG GCCGCCTCGA AGGGGGCCGA GGCACTCTTC
CTGGAAGTCG ACGAGACGAA CCAAGCCGCG ATCGGGCTCT ACGGAAAGCT CGGCTTTCAC
AAGGTAGGCG AGCGCAAGGC CTATTATCAG GCGCGGCCGG GCGAGCGCAG CGCGGCGCTT
GTCATGCGGC TCGATCTTCG ATAG
 
Protein sequence
MSLTDYFTRR TEFDIFPLEE ADLGAAAALH RQRFASAWSD GEIHGLLSQE TVFGFVARQT 
NANGRFRPAF GGFVLSRAVA GEAEILTIGV DARFSRSGLG WRLMQAAMRE AASKGAEALF
LEVDETNQAA IGLYGKLGFH KVGERKAYYQ ARPGERSAAL VMRLDLR