Gene Smed_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0022 
Symbol 
ID5320849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp18885 
End bp19229 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content62% 
IMG OID640788953 
Producthypothetical protein 
Protein accessionYP_001325717 
Protein GI150395250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00013194 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCAAGA AACTCATCAA CATCGTCGTT TTCGTGCCGC TGGGAGTGCT GCTGATCATA 
TTGAGCGTGG CCAATCGCCA GACGGTAACG CTCGCGCTCA ATCCGTTCGA ACCGTCCGAC
AGCCTGCTGT CGGTCTCGGC GCCCTTTTTC GTATTCCTCT TTCTCGCAGT GATTCTGGGG
CTCGTCCTCG GCGCCGCGGC AACCTGGTTC ACTCAGGCGA AATATCGGCG CCGTGCGCGC
AGTGAGGCAA GCGAGGCGGT GAAATGGCAT CGCGAGGCGG AAAAGCAGCG CAGCCAGGCG
GAGAAGCTGG CGACGCAGGC GAGCCTGCCC GCGCCGCAGG GCTGA
 
Protein sequence
MLKKLINIVV FVPLGVLLII LSVANRQTVT LALNPFEPSD SLLSVSAPFF VFLFLAVILG 
LVLGAAATWF TQAKYRRRAR SEASEAVKWH REAEKQRSQA EKLATQASLP APQG