Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_4028 |
Symbol | |
ID | 6474922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4554353 |
End bp | 4554982 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642733241 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_002030410 |
Protein GI | 194367800 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.180103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTGGA TGGGCATCCA GGACCTGTGG ACGTTTCTGG TCGCCGTGCT GGTGTTTCTC GCCCTGCCCG GCCCCGGCAC CTTCACCCTG CTGACCGCCA CCGGCCGTGG CGGCGTGCGT GGCGGCTACA CCGCGCTGGC CGGCCTGCTG GTCGGTGACC AGATCCTGAT GTGGCTTGCG CTGGCCGGCG TGGCCGCGCT GCTCAAGGCC AACCCACTGG TGTTCCACGC GGTGCAGTAC CTCGGCGCGG CCTACCTGGT GTGGGTGGGC ATCAGCCTGC TGCGCACGCC CAAGCATGAG GGCGGTGACG CCGGCCCGAT CCGCATGCAG CCGGGTCGCT ACTTCCAGCA GGCGATCCTG GTCAGCCTGC TCAACCCGAA GGCGATCCTT TTTTACATGG CCTTCCTGCC GTTGTTCATC GATCCGAAGG CGCACCAGGG CATTGCTACC TTTGCGGCGC TGGCCGGCAT CATCCTGGTG GTCAGCATCG CCTACTGCTC GATGTTGATC GGGGTCGGCA ATCTGGCCCG CCGCCGGCTG ATCCAGCACC CGCGGATCAG CGATGCGCTG CGCCGCGTGG CCGGCCTGTT CCTGGTGGGG TTCGGCATCC GGCTGGGGCT GAACGGATGA
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Protein sequence | MPWMGIQDLW TFLVAVLVFL ALPGPGTFTL LTATGRGGVR GGYTALAGLL VGDQILMWLA LAGVAALLKA NPLVFHAVQY LGAAYLVWVG ISLLRTPKHE GGDAGPIRMQ PGRYFQQAIL VSLLNPKAIL FYMAFLPLFI DPKAHQGIAT FAALAGIILV VSIAYCSMLI GVGNLARRRL IQHPRISDAL RRVAGLFLVG FGIRLGLNG
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