Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3996 |
Symbol | |
ID | 6474890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4515657 |
End bp | 4516523 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642733209 |
Product | Aldose 1-epimerase |
Protein accession | YP_002030378 |
Protein GI | 194367768 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.342711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.114283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTCGA ATCTGGACAT CAGCACCGGC CTGTATCACG GGCTGGAGGC CTGGCAGGTG CGAACCGCCA ATGCCACGGC GGTCATCAGC GTGTTCGGTG GACAGCTGCT GTCGTTCATT CCGGAAGGGC AGCACGACCT GTTGTGGCTG TCGCCCACGC GCGCCGAACT GCCCACGCCG ATCCGTGGCG GTGTGCCGGT GTGCTGGCCG TGGTTCGGCC GCCAGGGCCA GGACGCTGAT GTTCCCGCAC ACGGGTTGGT GCGTACCGCG CGCTGGGAGC TGCTGCAGGC CCTCCAGGGC GATGACGGTG AGGTGACGCT GCAACTGGCG CCACCTCCGT GCGTCGACCT CGGCCTGCGC CTGCAGATGC AGGTGCGCAT CGGCCACCAG CTGCATCAGC AGTTGACCAG CGAAAACATC GGGGCTTCGC CGGTGACCTT CACCCAGGCC CTGCACAGCT ATTTCCGCGT TGGCGATGCC GGTCGCGTCG AGGTGGATGG CCTCGATGGA CTGCAGTATC TCGACAAGTA CGAGGATTAC GCGCAGGCGC GCCTGCAGCA GGGACCGTGG TCATTGCGTG ATCCGCGTGA TCCCGGCCGC TGCGATCGCA TCTATACCGG TGCCGGCGGC CATTACGTGC TGCGTGATCC CGTACTGCAG CGGCGGATCG AGATCCGCAG CGAAGGCAGC CAGACCCTGG TGGCATGGAA CCCGGGTGCG GACGCGGCGG CGAAGATGGC GGACGTTGGC GACGGCTGGC ACGATTATGT CTGCCTGGAG GTGGCCAATG CCGGCCCCGA GCAGATCACC CTCGCACCGG GGGAGCGCCA CCGGTTGGCA CAGACCCTGG CCAGTGCCCC GCTATAG
|
Protein sequence | MQSNLDISTG LYHGLEAWQV RTANATAVIS VFGGQLLSFI PEGQHDLLWL SPTRAELPTP IRGGVPVCWP WFGRQGQDAD VPAHGLVRTA RWELLQALQG DDGEVTLQLA PPPCVDLGLR LQMQVRIGHQ LHQQLTSENI GASPVTFTQA LHSYFRVGDA GRVEVDGLDG LQYLDKYEDY AQARLQQGPW SLRDPRDPGR CDRIYTGAGG HYVLRDPVLQ RRIEIRSEGS QTLVAWNPGA DAAAKMADVG DGWHDYVCLE VANAGPEQIT LAPGERHRLA QTLASAPL
|
| |