Gene Smal_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3996 
Symbol 
ID6474890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4515657 
End bp4516523 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID642733209 
ProductAldose 1-epimerase 
Protein accessionYP_002030378 
Protein GI194367768 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.342711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.114283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCGA ATCTGGACAT CAGCACCGGC CTGTATCACG GGCTGGAGGC CTGGCAGGTG 
CGAACCGCCA ATGCCACGGC GGTCATCAGC GTGTTCGGTG GACAGCTGCT GTCGTTCATT
CCGGAAGGGC AGCACGACCT GTTGTGGCTG TCGCCCACGC GCGCCGAACT GCCCACGCCG
ATCCGTGGCG GTGTGCCGGT GTGCTGGCCG TGGTTCGGCC GCCAGGGCCA GGACGCTGAT
GTTCCCGCAC ACGGGTTGGT GCGTACCGCG CGCTGGGAGC TGCTGCAGGC CCTCCAGGGC
GATGACGGTG AGGTGACGCT GCAACTGGCG CCACCTCCGT GCGTCGACCT CGGCCTGCGC
CTGCAGATGC AGGTGCGCAT CGGCCACCAG CTGCATCAGC AGTTGACCAG CGAAAACATC
GGGGCTTCGC CGGTGACCTT CACCCAGGCC CTGCACAGCT ATTTCCGCGT TGGCGATGCC
GGTCGCGTCG AGGTGGATGG CCTCGATGGA CTGCAGTATC TCGACAAGTA CGAGGATTAC
GCGCAGGCGC GCCTGCAGCA GGGACCGTGG TCATTGCGTG ATCCGCGTGA TCCCGGCCGC
TGCGATCGCA TCTATACCGG TGCCGGCGGC CATTACGTGC TGCGTGATCC CGTACTGCAG
CGGCGGATCG AGATCCGCAG CGAAGGCAGC CAGACCCTGG TGGCATGGAA CCCGGGTGCG
GACGCGGCGG CGAAGATGGC GGACGTTGGC GACGGCTGGC ACGATTATGT CTGCCTGGAG
GTGGCCAATG CCGGCCCCGA GCAGATCACC CTCGCACCGG GGGAGCGCCA CCGGTTGGCA
CAGACCCTGG CCAGTGCCCC GCTATAG
 
Protein sequence
MQSNLDISTG LYHGLEAWQV RTANATAVIS VFGGQLLSFI PEGQHDLLWL SPTRAELPTP 
IRGGVPVCWP WFGRQGQDAD VPAHGLVRTA RWELLQALQG DDGEVTLQLA PPPCVDLGLR
LQMQVRIGHQ LHQQLTSENI GASPVTFTQA LHSYFRVGDA GRVEVDGLDG LQYLDKYEDY
AQARLQQGPW SLRDPRDPGR CDRIYTGAGG HYVLRDPVLQ RRIEIRSEGS QTLVAWNPGA
DAAAKMADVG DGWHDYVCLE VANAGPEQIT LAPGERHRLA QTLASAPL