Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3941 |
Symbol | |
ID | 6474825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4436164 |
End bp | 4438938 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642733144 |
Product | DNA polymerase I |
Protein accession | YP_002030323 |
Protein GI | 194367713 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAT TAGTCCTGAT CGACGGGTCC AGTTACCTGT ACCGCGCGTT CCACGCGCTG CCGCCCCTGT CCAATGCACA GGGCGAACCC ACCGGCGCGC TGTTCGGCGT GGTCAACATG CTGCGCTCGA CCCTGAAGGA GCGCCCGGCC TACGTGGCGT TCGTGGTCGA TGCGCCCGGC AAGACCTTCC GCGATGACCT GTACGAGCAG TACAAGGCCA ACCGCCCGCC GATGCCGGAC GAGCTGCGCA GCCAGGTTGA ACCGATGTGC CGCATCGTCG AAGCGCTGGG CATCAGCATC CTGCGCATCC CTGGCGTGGA GGCCGATGAT GTGATCGGCA CGCTGGCCCT GCAGGGCGTG GCGCAGGACC TGAAGGTGAC CATCTCCACC GGCGACAAGG ACTTTGCCCA GCTGGTGCGC CCGGGCATCG AACTGGTCAA CACCATGACC GGCAGCCGCA TGGATTCCGA TGCGGCGGTG ATGGAGAAGT TCGGCGTGCG CGCCGACCAG ATCATCGACC TGCTGGCGCT GATGGGCGAC ACCGTCGACA ACGTGCCGGG CGTGGAGAAA TGTGGGCCGA AGACCGCCGC CAAGTGGCTG GCCGAGTACC AGCACCTGGA TGGGGTGATG GCGGCCGCGC CGACCATGAA GGGCAAGATC GGCGAAAACC TGCGCGCCGC GCTGGAGCGC CTGCCGCTGA ACCGCGAGCT GGTGACCATC CGCACCGACG TGGAGCTGGA GGCCAGCCCG ACCACGCTGG CCCTGCGCGA GCAGGACGTG CCGGAGCTGA CCGAGCTGTA TGCGCGCTAT GGCTTCACCC AGGCGCTGAA GGAGCTGGGT GCACCGCTGC CGGCGCCGAC GGCCGCCAGC GAAGCAACGC CGAGCCTGCG TGGCACCGCC GCTGGCTTCG CCCGGGGCAG CGCCGAGGCA CCGGCAGCGG GCACGCTGGA TCCGGCCCTG GCCGCGCCGG GTGAATACGA GACCGTGCTG ACCGCCGAGC AGCTGCAGGC CTGGGTCGAG CGCCTGCAGC AGGCGGACCT GATCAGTTTC GATACCGAAA CCGATGCGCT GGACGCGATG CGTGCGCGCC TGGTGGGCAT CAGCCTGGCG GTCGAGCCGG GCAAGGCCGC CTATATTCCG GTCGGCCACG ATTACCCGGG CGCGCCGCCG CAGCTGCCGA TGCAGCAGGT GCTGGACGCA CTGCGCCCGG TGTTGCAGGA CCCGGCGAAG AAGAAGCTGG GCCAGCACGG CAAGTACGAC CTGCACGTAC TGCGCCGCCA CGGCGTGGAG GTGCAGGGCT ACCACGACGA CACCATGCTC GAGAGCTTCG TGCTCAATTC CACCGCCACC CGCCACGACA TGGATTCGCT GGCCCTGCGT TACCTGGGCT ACAACACCAT CAAGTTCGAG GACGTGGCCG GCAAGGGCGC CAAGCAGATT CCGTTCTCGC AGGTGGGCAT CGACGAAGCC AGCCGCTACG CGGCCGAGGA CGCCGACATC ACCCTGCGCC TGCACCGCGC GCTGCAACCG CAGCTGCTGG CCGAGCCGGC GCTGGACAGC GTGTACCGCG ACATCGAGAT GCCGCTGGTG CCGGTGCTCA CCAGCATCGA AGCCAATGGC GTGCGGATCG ATACCGTCGA GCTGCGCCGG CAGAGCCAGG ACCTGTCCTC GCGCATGCTG GCCGCGCAGC AGAAGGCCAC CGAGCTGGCC GGCCGCAGCT TCAACCTGGA TTCGCCCAAG CAGCTGCAGG CGGTGCTGTT CGATGAGCTG AAGCTGCCGG CGGTGGTGAA GACCCCGAAG GGCCAGCCCA GCACCAACGA AGAGGCACTG GAGGCGATTG CCGACCAGCA CGAGCTGCCG CGGGTGATCC TGGAGTACCG CGGCCTGGCC AAGCTGCGCA GCACCTATAC CGACAAGCTG CCGGAGATGG TCAATCCGGA CACCGGCCGC GTGCATACCA GCTACCACCA GTCCGGCGCC GCCACCGGCC GCCTGTCCTC GTCGGACCCC AACCTGCAGA ACATCCCGAT CCGCACCGAG GATGGCCGCC GTATCCGACG CGCATTCATC GCCCCGGAGG GCTTCCAGCT GCTGGCGGCC GACTATTCGC AGATCGAGCT GCGGATCATG GCCCATCTGT CGGAAGATCC GGGCCTGGTG GGCGCCTTCG AGCAGGGCGC CGACGTCCAC CGCGCCACCG CCGCCGAGGT GTTCGGGCGC ACGCTGGAAG AGGTGACTCC GAACGAGCGC CGCGCGGCCA AGGCGATCAA CTTCGGCCTG ATGTACGGCA TGAGCGCCTT CGGCCTGGCC CGCAACCTGG GCATCGACCG TGGCCAGGCG CAGGACTACG TGGCGCTGTA CTTCAGCCGC TACCCGGGCG TGCGTGATTT CATGGAGCGG ATGCGCCAGC AGGCCCGCGA CCAGGGCTAT GTGGAAACCC TGTTCGGCCG CCGCCTGTAC CTGAACGACA TTCATGCACG TAACCAGGGC CTGCGCGCCG GTGCCGAGCG CGCCGCGATC AACGCGCCGA TGCAGGGCAC CGCCGCCGAC ATCATCAAGC GTGCGATGGT GGACGTGGAC CAGTGGCTGC GTGACAGCGG CGCGCCGGCA CGGATGATCC TGCAGGTGCA CGATGAACTG GTGTTCGAAA CCGAAAGCAG TTTCGTCGAG GAGTTGCGTT TGCAGGTGGT CGAGCGCATG TCGCAAGCGG CCAAACTGCG GGTGCCGCTG GTGGTCGATA CCGGCATCGG CAACAACTGG GACGAAGCAC ACTGA
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Protein sequence | MSRLVLIDGS SYLYRAFHAL PPLSNAQGEP TGALFGVVNM LRSTLKERPA YVAFVVDAPG KTFRDDLYEQ YKANRPPMPD ELRSQVEPMC RIVEALGISI LRIPGVEADD VIGTLALQGV AQDLKVTIST GDKDFAQLVR PGIELVNTMT GSRMDSDAAV MEKFGVRADQ IIDLLALMGD TVDNVPGVEK CGPKTAAKWL AEYQHLDGVM AAAPTMKGKI GENLRAALER LPLNRELVTI RTDVELEASP TTLALREQDV PELTELYARY GFTQALKELG APLPAPTAAS EATPSLRGTA AGFARGSAEA PAAGTLDPAL AAPGEYETVL TAEQLQAWVE RLQQADLISF DTETDALDAM RARLVGISLA VEPGKAAYIP VGHDYPGAPP QLPMQQVLDA LRPVLQDPAK KKLGQHGKYD LHVLRRHGVE VQGYHDDTML ESFVLNSTAT RHDMDSLALR YLGYNTIKFE DVAGKGAKQI PFSQVGIDEA SRYAAEDADI TLRLHRALQP QLLAEPALDS VYRDIEMPLV PVLTSIEANG VRIDTVELRR QSQDLSSRML AAQQKATELA GRSFNLDSPK QLQAVLFDEL KLPAVVKTPK GQPSTNEEAL EAIADQHELP RVILEYRGLA KLRSTYTDKL PEMVNPDTGR VHTSYHQSGA ATGRLSSSDP NLQNIPIRTE DGRRIRRAFI APEGFQLLAA DYSQIELRIM AHLSEDPGLV GAFEQGADVH RATAAEVFGR TLEEVTPNER RAAKAINFGL MYGMSAFGLA RNLGIDRGQA QDYVALYFSR YPGVRDFMER MRQQARDQGY VETLFGRRLY LNDIHARNQG LRAGAERAAI NAPMQGTAAD IIKRAMVDVD QWLRDSGAPA RMILQVHDEL VFETESSFVE ELRLQVVERM SQAAKLRVPL VVDTGIGNNW DEAH
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