| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3896 |
|---|
| Symbol | |
|---|
| ID | 6474780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 4385571 |
|---|
| End bp | 4387691 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642733099 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002030278 |
|---|
| Protein GI | 194367668 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.337027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.882129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGT CTGTCCGTGC TCCGCGCCTG CAGTCCAAGC TGCTCGGCGC GGTTTCCGTT
GGTCTGGCCG TGGTCCTGCT GTGTGCTCTG GCCGGCCTCG CCTCCGCCTG GTTGAAACTG
TCCACCGAGG TTCCGCCCGA AGTCGCCCAC AGCCGCGACG CCGAGCGCCT GCAGCGCGAG
TTCCGCGGGC AGGTGCAGGA ATGGAAGAAC GTACTGCTGC GTGGCCACGA CGACGCGTTG
CGCCAGCGCC ACCTGGACGC CTTCGACAGC GAGGGCCGTC TGGTCGAACA GCTGGCCAAG
GGCCTGGTCA GCAGCCCGGA TGCACGCACG CGCGAACTGG CGCAAGCGTT CATCGGCCTG
CACGCGCAGC TGCAGCAGGA CTATCACGCG GCGCTGCAGG CATTCGCCGA GGCCAGCTAC
GATCCCGCCG CCGGCGACAA TCTCGTGCGC GGCAAGGACC GCCCGGTGGC AACCGCGCTG
GATGCGTTGA GTACGCACGC CACGCAGGTG GCCGAAGCGG CGGTAGCGGC CCGTTCGCAG
CAGGCGCGGC AGACGCTGCT GCTGTGCGCG GCGCTGACCG TGCTGGCCGC CGTGTTGCTG
CTGATGGGGC TGGGCTGGTG GCTGCGGCGT GCGGTGGTGC AGCCGGTGCT GGCGGTGGAG
GCCGCTGCGC GCGCAGTGGC CGCCGGTGAT CTGGAGCATG TTGTGCAGGT GCGCAGCCGC
GATGAGATCG GTCGGCTCGC GCAGGCCATG CAGGCGGTGC AGTCCACACT GCGCGGCGTG
CTCGATGCGC AGGCCACGAT GGCACAGGCG CATGAAGCCG GCACCATCAG CCACCGCATG
GACGCCAGTG CCTTCCCCGG CGCATTCGGC GAAATGGTCG CCGACAGCAA CGCGCTGGTC
GATGCGCACA TCCAGGTAAA GCTGCGCGCG ATTGCGATCA TGGGCCGTTA CGCCATCGGT
GACCTCAGCC AGGACATGGA GCGGCTGCCG GGCGAGAAGG CCGTGATCAC CGACGCGCTG
AATACCGCCA AGGTCAATCT CGGCATGATC AATGGCGAGA TCCGCCGCCT GGCCGAAGCC
GCTGCCGCCG GTGACTTCAG CCAGCGTGGC GACAGCGCGC GCTTCGAGCA TGACTTCCGC
GCGATGGTCG ATGGCTTGAA CCGGTTGATG CAGACCACCG AGCAGAACCT CGGCGAGGTC
TCCAGCATGC TGCGTGCGAT CGCCGATGGT CGCCTCGGCG CGCGCATGCA CGGCGATTTC
CAGGGCGTGT TCGCGCGCAT CGCCGGCGAT GCCAACGCCA CTGCCGCGCA GCTGGCGACC
ATCGTCACCG ACATCAAGCA CGCCTCCGGC AACATCCACA CTGCGGCTGC AGAGATCGCC
GCCGGCAACA ATGATCTGTC GCGCCGTACC GAGCAGCAGG CGGCCAATCT GGAAGAGACT
GCAGCATCGA TGGAAGAACT GACCTCCACC GTGCGCCAAA ACGCCGAGCA TGCACGCCAG
GCCAACCAGC TGGCGATCGG CGCGCACACG GTCGCCTCGC AGGGCGGCAG CGTGGTCGGC
CAAGTGGTGG CGACGATGGG TGCGATCGAG ACCTCGTCAC GGCAGATCGC CGAGATCATC
AGCGTGATCG ATGGCATCGC ATTCCAGACC AACATCCTGG CGCTGAACGC GGCAGTGGAA
GCCGCGCGGG CCGGCGAACA GGGCCGCGGC TTCGCGGTGG TCGCCAGTGA AGTGCGCACG
CTGGCGCAGC GCTCGGCGGC GGCCGCGAAG GAGATCAAGG CATTGATCGA AGCCTCGGTT
GAGCAGGTCG GCCACGGCGC GCAGCGCGTG CGCGAGGCCG GTGACACCAT GGCCGAGATC
GTGGCATCGG TGCAGCGCGT GACCGACATC ATGGCCGAGA TTTCGGCGGC CTCGCAGGAG
CAGAGCGCGG GTATCGAGCA GGTCAGCCAG ACCGTGATCC AGATGGATGG CACCACCCAG
CAGAACGCCG CGCTGGTGGA GGAAGCCAGT GCCGCCGCAC GCAGCCTGGA ACAACAGGCG
AACCGACTGA TCGACGCGGT GGATGTGTTC GATCTGTCGA CCACAACAGC GGCGAAGGAC
GCGTTGGCGC GTGCGGCCTG A
|
|---|
| Protein sequence | MNASVRAPRL QSKLLGAVSV GLAVVLLCAL AGLASAWLKL STEVPPEVAH SRDAERLQRE
FRGQVQEWKN VLLRGHDDAL RQRHLDAFDS EGRLVEQLAK GLVSSPDART RELAQAFIGL
HAQLQQDYHA ALQAFAEASY DPAAGDNLVR GKDRPVATAL DALSTHATQV AEAAVAARSQ
QARQTLLLCA ALTVLAAVLL LMGLGWWLRR AVVQPVLAVE AAARAVAAGD LEHVVQVRSR
DEIGRLAQAM QAVQSTLRGV LDAQATMAQA HEAGTISHRM DASAFPGAFG EMVADSNALV
DAHIQVKLRA IAIMGRYAIG DLSQDMERLP GEKAVITDAL NTAKVNLGMI NGEIRRLAEA
AAAGDFSQRG DSARFEHDFR AMVDGLNRLM QTTEQNLGEV SSMLRAIADG RLGARMHGDF
QGVFARIAGD ANATAAQLAT IVTDIKHASG NIHTAAAEIA AGNNDLSRRT EQQAANLEET
AASMEELTST VRQNAEHARQ ANQLAIGAHT VASQGGSVVG QVVATMGAIE TSSRQIAEII
SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRT LAQRSAAAAK EIKALIEASV
EQVGHGAQRV REAGDTMAEI VASVQRVTDI MAEISAASQE QSAGIEQVSQ TVIQMDGTTQ
QNAALVEEAS AAARSLEQQA NRLIDAVDVF DLSTTTAAKD ALARAA
|
|---|
| |