Gene Smal_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3878 
Symbol 
ID6474761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4366168 
End bp4367343 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID642733080 
Productchitin-binding domain 3 protein 
Protein accessionYP_002030260 
Protein GI194367650 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.785227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTGT CCCACCGGGC AGTCCTCGCT CTGTCCGTCG TTGCCGGCCT GGCCTTGTCC 
GGCAGCGCCC TCGCCCACGG CACCATGTCC AAGCCGCTCA GCCGCGTGAA GCAGTGCCAC
GAAGGCAATC CGGAAAACCC GACCAACCCG GCCTGTGCCG CGGCCAAGGC CATCGGCGGC
GCGCAGCCGT TCTATGACTG GAGCGCGATC GCGCATGGCA ACGCCAATGG CAACCACCGC
GACCTGGTGC GCGATGGCGA GCTGTGCAGC GCCAGCATCC CCAAGTACCG CGGCCTCGAT
CTGAATCGCA GCGACTGGCC GACCACGCCG GTGCGCGCCG ATTCGCGTGG CCGCTACACC
TTCGAGTTCC TGGCGCCGGC GCCGCACGCC ACCCGAGAGT GGAAGTTCTA CGTGACCCGT
GACGGCTGGC AGCCGGGCAG CCCGCTGCGC TGGGCCGACC TGCAGGAATT CTGCACCCTG
GGCAACGTGC CGCTGTCCGA AGGCGGTGTC TACAAGCTGG ACTGCCCGCT GCCCAAGCGC
AGTGGCCAGC ACATCATCTA CAACACCTGG CAGCGCTCGG ATTCGCAGGA AGCGTTCTAC
ACCTGCATGG ACGTGCGCTT CGAAGGTGGC GGTGGCGTGG TTCCGCCGCC GCAGTGGCAG
GATGCCGGCG CGGTGACCGC CAATGGCGCA CTGGACGTGG ACAGCACCGT GACCCTGCGT
GTGTTCAATG CCAACGGCAA CGACCTGGAG CGCGTGGAAA CCAAGCTGGC CGCTGGCCAG
ACCAGCCCGA CGCAGTGGCC GCTGGCCCTG GCCCGCAAGG TCAACGCCAG CGCACAGCAC
GCGCGCGTGG GTGTGATGAA GAACGGCGTG ATCACGCCGG TCGCCTCGGC CACCGACAAC
CGCGTGTACC TGAAGCCGGG CAACCGCTTC CAGCTGGAAA CCCAGGTACC CGGTCCGGGC
CCGATCGATC CGGTCGATCC GCCGGGCGGC GACTTCGACT TCGTGTATCC GGCCGGCCTC
GGCAGCTACA AGCCGGGCGA GACCGTGGTG AAGGGCACCG ACGGCAAGCT GTATGCCTGC
CGCCCGTTCC CGGAAGGTGC ATGGTGCAAC ATCAACGCCG ATGCCTACCG CCCGGGTACC
GGCTTTGCCT GGCGCGACGC CTGGATCGCG TACTGA
 
Protein sequence
MHLSHRAVLA LSVVAGLALS GSALAHGTMS KPLSRVKQCH EGNPENPTNP ACAAAKAIGG 
AQPFYDWSAI AHGNANGNHR DLVRDGELCS ASIPKYRGLD LNRSDWPTTP VRADSRGRYT
FEFLAPAPHA TREWKFYVTR DGWQPGSPLR WADLQEFCTL GNVPLSEGGV YKLDCPLPKR
SGQHIIYNTW QRSDSQEAFY TCMDVRFEGG GGVVPPPQWQ DAGAVTANGA LDVDSTVTLR
VFNANGNDLE RVETKLAAGQ TSPTQWPLAL ARKVNASAQH ARVGVMKNGV ITPVASATDN
RVYLKPGNRF QLETQVPGPG PIDPVDPPGG DFDFVYPAGL GSYKPGETVV KGTDGKLYAC
RPFPEGAWCN INADAYRPGT GFAWRDAWIA Y