| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3851 |
|---|
| Symbol | |
|---|
| ID | 6474734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 4338601 |
|---|
| End bp | 4340439 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642733053 |
|---|
| Product | dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_002030233 |
|---|
| Protein GI | 194367623 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAT ACCGTTCCCG TACCTCCACC GCCGGCCGCA ACATGGCCGG CGCCCGCGCC
CTGTGGCGCG CCACCGGCAT GAAGGACGGC GACTTCCACA AGCCGATCAT CGCCATCGCC
AACTCCTTCA CCCAGTTCGT GCCCGGCCAC GTGCACCTGA AGGACCTCGG CCAGCTGGTC
GCCCGCGAGA TCGAAAAAGT CGGCGGCGTC GCCAAGGAAT TCAACACGAT CGCCGTGGAC
GATGGCATCG CCATGGGTCA CGACGGCATG CTGTATTCGC TGCCCAGCCG CGAAATCATC
GCCGACTCGG TGGAGTACAT GGCCAACGCG CACTGCGCCG ATGCACTGGT GTGCATTTCC
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCTGCGC TGCGCCTCAA CATCCCGGTG
GTGTTCGTCT CCGGCGGGCC GATGGAAGCG GGCAAGACCA AGCTGTCCGA GCACAAGCTG
GACCTGGTCG ATGCGATGGT GATCGCCGCC GACGAAAGCG CCAGCGACGA AAAGGTGGCC
GAGTTCGAGC GCAGTGCCTG CCCGACCTGC GGGTCGTGCT CGGGCATGTT CACCGCCAAC
TCGATGAACT GCCTGACCGA AGCACTGGGC CTGTCGTTGC CCGGCAACGG CTCCACGCTG
GCCACCCACG CCGACCGCGA GCAACTGTTC CTGCGCGCCG GCCGACTGAT CGTCGAGCTG
TGCCACCGCT GGTATGGCGG CGAAGACCCG ACTGCGCTGC CGCGTGGCAT CGCCACCCAG
GCCGCGTTCG CCAACGCAAT GACCCTGGAC ATCGCCATGG GCGGGTCCAC CAATACCATC
CTGCACCTGC TGGCGGCCGC GCAGGAAGCG GAGGTGGACT TCGACCTGAC CCATATCGAC
GCGTTGTCGC GGCGCGTACC GCAGCTGTGC AAGGTGGCGC CGAACACGCC CAAGTACCAC
ATGGAAGACG TGCACCGCGC GGGCGGCGTG TACGGCATCC TCGGTGAACT GGCGCGCGGT
GGACTGCTGG ATACCGGTGT GCCGACCGTG CACAGCCGCA GCCTGGCCGA TGCCATCGCA
CGCTGGGACG TGGCGGTCAG CAGCGACTCG AGCGTGCAGG ACTTCTTCCG TGCCGGCCCG
GCCGGCATCT CCACCCAGGT GGCCTTCAGC CAGGCCACAC GCTGGCCGAC GCTGGACGTG
GACCGTGCCG AGGGCTGCAT CCGCAGCGTC AAGCACGCCT ATTCGGCCGA AGGCGGCCTG
GCCGTGCTGC GCGGCAACCT GGCCGTGGAT GGGTGCGTGG TGAAGACCGC CGGCGTGGAC
GAGTCGATCC ATGTGTTCGA AGGCAACGCG CGCGTCTACG AAAGCCAGGA CGCGGCCGTG
GCCGGCATCC TCGCCGACGA GGTGAAGGCC GGCGACGTGG TGGTCATCCG CTACGAAGGC
CCGAAGGGTG GCCCCGGCAT GCAGGAAATG CTGTACCCGA CCAGCTACCT GAAATCGAAG
GGACTGGGCA AGCAGTGCGC ACTGCTCACC GATGGCCGTT TCTCCGGCGG CACCTCGGGA
CTGTCGATCG GCCACGTCTC GCCGGAAGCC GCCAGCGGCG GCACGATCGG TCTGGTGGAA
GATGGCGACC GCATCCGCAT CGACATCCCG GCGCGCCGCA TCGATCTGCT GCTGGATGAA
GCCACGCTGG CCCAGCGCCG CGCCGACGCC GATGCCCGTG GCTGGAAGCC GCGCGCGCCG
CGCCCGCGCA AGGTCACCAG CGCACTGAAG GCCTACGCGC TGCTCGCCAC CAGCGCCGAC
AAGGGCGCCG TGCGCAACAC CGCGCTGCTG GGCGATTGA
|
|---|
| Protein sequence | MPEYRSRTST AGRNMAGARA LWRATGMKDG DFHKPIIAIA NSFTQFVPGH VHLKDLGQLV
AREIEKVGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADSVEYMANA HCADALVCIS
NCDKITPGML MAALRLNIPV VFVSGGPMEA GKTKLSEHKL DLVDAMVIAA DESASDEKVA
EFERSACPTC GSCSGMFTAN SMNCLTEALG LSLPGNGSTL ATHADREQLF LRAGRLIVEL
CHRWYGGEDP TALPRGIATQ AAFANAMTLD IAMGGSTNTI LHLLAAAQEA EVDFDLTHID
ALSRRVPQLC KVAPNTPKYH MEDVHRAGGV YGILGELARG GLLDTGVPTV HSRSLADAIA
RWDVAVSSDS SVQDFFRAGP AGISTQVAFS QATRWPTLDV DRAEGCIRSV KHAYSAEGGL
AVLRGNLAVD GCVVKTAGVD ESIHVFEGNA RVYESQDAAV AGILADEVKA GDVVVIRYEG
PKGGPGMQEM LYPTSYLKSK GLGKQCALLT DGRFSGGTSG LSIGHVSPEA ASGGTIGLVE
DGDRIRIDIP ARRIDLLLDE ATLAQRRADA DARGWKPRAP RPRKVTSALK AYALLATSAD
KGAVRNTALL GD
|
|---|
| |