| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3808 |
|---|
| Symbol | ubiA |
|---|
| ID | 6474690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4283676 |
|---|
| End bp | 4284611 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642733009 |
|---|
| Product | 4-hydroxybenzoate octaprenyltransferase |
|---|
| Protein accession | YP_002030190 |
|---|
| Protein GI | 194367580 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.466325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAG CCCTGCCAGA GGGGCAGGAG TATCCTATCG CCATGGCTGA TACCCCCCTC
ACTTCGCCGC AGTCGCCGGC GACGCCGCGT TGGCGGCATT ACTGGAGTCT GATGCGCGCT
GATCGCCCGA TCGGCACGCT GCTGCTGCTG TGGCCCACCT GGTGGGCGTT GTGGCTGGCT
GCGGGCGGCA TGCCGCCGCT GTGGACGCTG TTCGTGTTCA CCGCCGGCGT GTGGCTGACC
CGCTCGGCCG GTTGCGTCAT CAATGACTAC GCCGACCGCT GGCTGGATCC GCACGTGGAG
CGCACCAAGG CGCGCCCGCT GGCCACCGGT GCGATCAGTG GCCGCGCTGC GCTGGCGTTG
TTCGCCGTGC TGATGCTGGT GGCGTTCGGC CTGGTGCTGA CCCTGAACGG GCTGACCATT
GGCCTCAGCT TCATCGGTGT GTTCCTGGCC GCCAGCTACC CGTACCTGAA GCGCTACACC
CATCTGCCGC AGGTCTACCT GGGCATGTCG TTCGGCTGGG GCATCCCGAT GGCGTTCGCC
GCCGTGCAGG GCGAGGTGCC GCTGCTGGGC TGGCTGCTGT ATGCCGGCAA CATCCTGTGG
TCCACCGCCT ACGACACCTG GTACGCCATG GTCGACCGCG AGGACGATCT GAAGATGGGC
TCGCATTCCA CCGCGATCCT GTTCGGTGAT CTCGACCTGG TCATCCAGGG CGTGCTGTAC
GCGCTGTTCC TGGCGACCAT GGCGCTGGTC GGCGTGCGCG GCGGGCTGGG TGGCTATTAC
CTGGTGGGCG TGGCCGTGGC CACCGCACTG GTGGTGTACG AGTTCTGGAT CTGCCGCAAC
CGCGAGCGCG GCCCGTGCTT CAAGGCGTTC CTGCACAACA ACTGGGTGGG TGCCGCGCTG
TTCGCCGGCA TCGCCGTGGA CCTCGCGCTG CGCTGA
|
|---|
| Protein sequence | MGKALPEGQE YPIAMADTPL TSPQSPATPR WRHYWSLMRA DRPIGTLLLL WPTWWALWLA
AGGMPPLWTL FVFTAGVWLT RSAGCVINDY ADRWLDPHVE RTKARPLATG AISGRAALAL
FAVLMLVAFG LVLTLNGLTI GLSFIGVFLA ASYPYLKRYT HLPQVYLGMS FGWGIPMAFA
AVQGEVPLLG WLLYAGNILW STAYDTWYAM VDREDDLKMG SHSTAILFGD LDLVIQGVLY
ALFLATMALV GVRGGLGGYY LVGVAVATAL VVYEFWICRN RERGPCFKAF LHNNWVGAAL
FAGIAVDLAL R
|
|---|
| |