Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3610 |
Symbol | |
ID | 6474490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4064831 |
End bp | 4065997 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732809 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002029992 |
Protein GI | 194367382 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.479598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCG CCGAAAATTC CCGCTTCCGT CGTGCCCGCC TGTTGTGGGC GGTGCTGGCC ATCGCCCTCG TCGCCGTTCT GGCGTGGTGG CTGTGGCCCC GGAACGGCGC CGGCAGCAGC GACGATGCGC CGGGCAAGAC GGTGCCGGTA CGCGTGGCAC GCGCCAGCGC CGAGCCGCTG GTGCTGCGCC TGAAGGCGGT CGGTACGGTC ACCCCGCTGC ACAGCGTGGT GGTACGCAGC CGCGTGGATG GCGAACTGCT ACGGCTGCAT TTCCAGGAAG GCCAGCAGGT GAAGGCCGGC GATCTGCTGG CGCAGATCGA CCCGCGCCCG TATGAAGTGA AGCTGGCACA GGCGCAGGGT ACCCAGCAGC AGAATCTGGC CGAGCTGGAA AACGCCGAGC GCCAGCTGCA GCGCTACCGC GAACTGCAGA AGCAGAACTA CGTGTCCGGG CAGGAACTGA GCGACCAGCA GAGCAAGGTG CGCCAGCTGC AGGGCCGCCG CCTCAGCGAT CAGGCGTCTG TTGATGAAGC GCGCCTGCAG CTGCAGTACA CCCGCATCAC CGCGCCGGTC AGTGGCCGCG TCGGGCTGCG CCGGTTGGAC GTGGGCAACC TGGTGCGCGC CAGCGATGCC GAAGGCCTGG TGACGCTGGC GCAGACCGCG CCGATCAGCG TGCTGTTCAC CGTGCCCGAA CCCGAGCTGC CTGCGCTGCT CGATGCCGTG CAGGCGCAAC CGGCACTGGC GGTGGAAACC TGGGACCGCG AAGAACGCCG GCAGCTGGCC CGCGGCTCGC TGTCCAGCGT CGACAACCGC ATCGATACCA CCACCGGCAC ATTGAAACTG CGTGCGCACT TCGACAACCA CGATCTGGCG CTGTTCCCCA ACCAGTTCGT CAACGTCCGC CTGCAGCTGG GCGAGCAGCC CGCGCTGCTG ATTCCCGATG CCGCCGTGCA GTTCGGCAGC CAGGGCAACT ACGTGCATAT CGTCGACAAG GACAGCAAGG CACAACGCCG CACCGTGGTG CTCGGTCCGG CCGATGATGG ACGCGTGGCC GTGCGCTCCG GGCTGGCCGC AGGGGACAAG GTGGTGATCG AAGGCATCGA CGGGCTGGAA GACGGCACGG CGGTGGAGAT CATCACCGAG GAGGCCGCGA CCAAGGCCGG CGCATGA
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Protein sequence | MSVAENSRFR RARLLWAVLA IALVAVLAWW LWPRNGAGSS DDAPGKTVPV RVARASAEPL VLRLKAVGTV TPLHSVVVRS RVDGELLRLH FQEGQQVKAG DLLAQIDPRP YEVKLAQAQG TQQQNLAELE NAERQLQRYR ELQKQNYVSG QELSDQQSKV RQLQGRRLSD QASVDEARLQ LQYTRITAPV SGRVGLRRLD VGNLVRASDA EGLVTLAQTA PISVLFTVPE PELPALLDAV QAQPALAVET WDREERRQLA RGSLSSVDNR IDTTTGTLKL RAHFDNHDLA LFPNQFVNVR LQLGEQPALL IPDAAVQFGS QGNYVHIVDK DSKAQRRTVV LGPADDGRVA VRSGLAAGDK VVIEGIDGLE DGTAVEIITE EAATKAGA
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