Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3586 |
Symbol | |
ID | 6474466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4040047 |
End bp | 4041180 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732785 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_002029968 |
Protein GI | 194367358 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGCTTC GTTTTCGTAC GGTCGTCGCC GCGGCGATGC TGACCGTGGC TGCCTATGCT ACCGCCGTGG AAGTGAATGG CGGGCACCCG GACACCTATG TGGTCCGAAA AGGGGATACG TTGTGGGATA TCGCCGCACG TTTCCTGCAG AAGCCGTGGC TGTGGCCGGA GATCTGGCAG GCCAATCCGC AGATCGCCAA TCCGCACCTG ATCTATCCCG GTGACGTGCT CAGCCTGGCC TATCTGGACC GGGTGACCGT GGCAGCCCAG CCCGGCCCGC GCCAGGAGGC TCCGATCGAC GCCATTCCGC TGGCCCAGGT CGAGCCGTTC CTGAAGCAGC TGAGCGTGGT CGACAGCATC GAGCAGCTGC CCCAGGTGGT CAGCCTGGAA GACAGCCGCC TGCGCGTTTC CGGCGGCGAT ACCGCCTACG TGCGGCTGGC TGACGCCCAG CTGGGCCAGC GCTGGGCCGT GGTCCGCCCG ACGGTACGCT ATGCACAGCC CAAGCCGACC GAGGACCTGT CGGCCAATGG CGACGTCACC CCGGGCAGCG GCAACCTGTG GAAAGCCTAC AGCGCACCGA ACGCGCGTCG CGGCGTGCTC GGCTACGAGC TGGCCCAGCT TGCCACCGGC ACCATCACCC GGGTTGCCGA CGGCAAGGTC GAGGCCTCCA CCCTGGTGCT GGACAAGAAC GTGGGCGGCC GCGAAGTGCG TGTCGGCGAC CGACTGGTCC CGATCGAGGC GAAACCGTAC GACCTGCAGT TCGTGCCGCA TGTACCGGCT GCGGGTGTCG AAGGCGTCGA TGTGCGCGTG CTGGCTGTCA CCGACATGTT CACCGCCGGG GGCCCGCGCG ACGTGATCGC GATTTCGGCC GGTCGTGCCC AGGGCGTGGA CAACGGCACG GTGTTCTCGC TGTGGCGGCC GGGCCGCCAT GTGGCGCACC GCATGAAGTA CCCGACCTCG TCACGCATGG ACGACTCGCT CAGCAGCGGC GCCGGCCGGG TCTCGCTGCC AGACGAATAT GCTGCGCACG CGATGGTGTT CCGTACCTTC GACAACGTCA GCTACGCGCT GGTGATGCAG GGTGTGAAGC CGGTGCGCGT GGGTTACAAC GCCCTGCACC CGGACGCGAA GTAA
|
Protein sequence | MLLRFRTVVA AAMLTVAAYA TAVEVNGGHP DTYVVRKGDT LWDIAARFLQ KPWLWPEIWQ ANPQIANPHL IYPGDVLSLA YLDRVTVAAQ PGPRQEAPID AIPLAQVEPF LKQLSVVDSI EQLPQVVSLE DSRLRVSGGD TAYVRLADAQ LGQRWAVVRP TVRYAQPKPT EDLSANGDVT PGSGNLWKAY SAPNARRGVL GYELAQLATG TITRVADGKV EASTLVLDKN VGGREVRVGD RLVPIEAKPY DLQFVPHVPA AGVEGVDVRV LAVTDMFTAG GPRDVIAISA GRAQGVDNGT VFSLWRPGRH VAHRMKYPTS SRMDDSLSSG AGRVSLPDEY AAHAMVFRTF DNVSYALVMQ GVKPVRVGYN ALHPDAK
|
| |