Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3575 |
Symbol | |
ID | 6474455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4027541 |
End bp | 4028674 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642732774 |
Product | GTP cyclohydrolase |
Protein accession | YP_002029957 |
Protein GI | 194367347 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00738841 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCCT CCCCCGGTCC TGCCATGTCT GCTTCTTCCC TGTTCGGCGA TCCGGCCGCG ATCCGCTGCG AGCGCGCGGT GGCCGAACTG CGTGCCGGTC GCCCGGTCCT GCTCCACGAT GGCCAGGGCC AGCGCCTGGC GGTAATCGCC TTGGACAGCG CCACGGCCAG CAGCTTCGCC GCCTTCGCCA GTGCCGCCCG CGAGCGGCAT TACCTGTTCC TGACCGCCAC CCGCGCCCGC GTGCTTGGCG TGGAGGCCCC GCAAGGTGCG CGCCTGCCGC TGGCCGGTGT TGCCTTCGAC GCCCTGCCCT CGTTGGGCTA CCTGCGCGAG CCGGGCCCGA TGCCGGACGG CTGGAGCGCC GGTGACGCCT TCGATGCCGG CGCTGTTGAA CTGGCCCGGC TTGGCCTGCT GCTGCCGGCG ATGGTGGCGG TGCGCCTGGA CGCCGATGAC CGCACCTTCG ATGGCGCGGC CGAAGTCGCG CTGTGCGACC TGGCTGAAGG CGCGGCGCAT GCCGCCCACG ATTACGAACT GGTGGCACGT TCACCGGTGC CGCTGCGCGA CGTCGGCATG ACCACCTTCG CGGTGTTCCG CGGCGGCGTG GCCCAGCGCG ACCAGGTGGC GATCATCGTC GGCGAACCGG ACCTGTCAGC CGTGGTCCCG GTGCGGGTGC ATTCCTCTTG CCTGACCGGC GACCTGTTCG GTTCACTCAA GTGCGACTGC GGCGACCAGC TGCGGCGTGG CCTGCGCAAG CTGAAGGAAC TGGGCGGCGG CGTGCTGCTG TACCTGGACC AGGAAGGCCG TGGCACCGGC ATCGCCGCGA AGATGCGTGC TTACGGCTAC CAGCACGACG GCCTGGACAC CATCGACGCC GATGCACAGC TGGGCTTTGG TGCCGACGAA CGCCGCTACG GCAGCGCGGT GGCAATGCTG CGGGGCCTGG GCATCGCGCG CGTGGCCCTG CTCAGCAACA ACCCGACCAA GGCGCAGCGC CTGCGCAACG CCGGCATCGA GGTGCTGGAC TGTATCCCGG TCACCGGCGA GATCACCGCC GAGAACGAAC ACTACCTGCG TACCAAGGCC GATCGTGCCG GCCACATGCT GGATGTCGAC GCGCTGATCC AGGCTGCCCA GTAA
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Protein sequence | MSASPGPAMS ASSLFGDPAA IRCERAVAEL RAGRPVLLHD GQGQRLAVIA LDSATASSFA AFASAARERH YLFLTATRAR VLGVEAPQGA RLPLAGVAFD ALPSLGYLRE PGPMPDGWSA GDAFDAGAVE LARLGLLLPA MVAVRLDADD RTFDGAAEVA LCDLAEGAAH AAHDYELVAR SPVPLRDVGM TTFAVFRGGV AQRDQVAIIV GEPDLSAVVP VRVHSSCLTG DLFGSLKCDC GDQLRRGLRK LKELGGGVLL YLDQEGRGTG IAAKMRAYGY QHDGLDTIDA DAQLGFGADE RRYGSAVAML RGLGIARVAL LSNNPTKAQR LRNAGIEVLD CIPVTGEITA ENEHYLRTKA DRAGHMLDVD ALIQAAQ
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