Gene Smal_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3575 
Symbol 
ID6474455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4027541 
End bp4028674 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content70% 
IMG OID642732774 
ProductGTP cyclohydrolase 
Protein accessionYP_002029957 
Protein GI194367347 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00738841 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCT CCCCCGGTCC TGCCATGTCT GCTTCTTCCC TGTTCGGCGA TCCGGCCGCG 
ATCCGCTGCG AGCGCGCGGT GGCCGAACTG CGTGCCGGTC GCCCGGTCCT GCTCCACGAT
GGCCAGGGCC AGCGCCTGGC GGTAATCGCC TTGGACAGCG CCACGGCCAG CAGCTTCGCC
GCCTTCGCCA GTGCCGCCCG CGAGCGGCAT TACCTGTTCC TGACCGCCAC CCGCGCCCGC
GTGCTTGGCG TGGAGGCCCC GCAAGGTGCG CGCCTGCCGC TGGCCGGTGT TGCCTTCGAC
GCCCTGCCCT CGTTGGGCTA CCTGCGCGAG CCGGGCCCGA TGCCGGACGG CTGGAGCGCC
GGTGACGCCT TCGATGCCGG CGCTGTTGAA CTGGCCCGGC TTGGCCTGCT GCTGCCGGCG
ATGGTGGCGG TGCGCCTGGA CGCCGATGAC CGCACCTTCG ATGGCGCGGC CGAAGTCGCG
CTGTGCGACC TGGCTGAAGG CGCGGCGCAT GCCGCCCACG ATTACGAACT GGTGGCACGT
TCACCGGTGC CGCTGCGCGA CGTCGGCATG ACCACCTTCG CGGTGTTCCG CGGCGGCGTG
GCCCAGCGCG ACCAGGTGGC GATCATCGTC GGCGAACCGG ACCTGTCAGC CGTGGTCCCG
GTGCGGGTGC ATTCCTCTTG CCTGACCGGC GACCTGTTCG GTTCACTCAA GTGCGACTGC
GGCGACCAGC TGCGGCGTGG CCTGCGCAAG CTGAAGGAAC TGGGCGGCGG CGTGCTGCTG
TACCTGGACC AGGAAGGCCG TGGCACCGGC ATCGCCGCGA AGATGCGTGC TTACGGCTAC
CAGCACGACG GCCTGGACAC CATCGACGCC GATGCACAGC TGGGCTTTGG TGCCGACGAA
CGCCGCTACG GCAGCGCGGT GGCAATGCTG CGGGGCCTGG GCATCGCGCG CGTGGCCCTG
CTCAGCAACA ACCCGACCAA GGCGCAGCGC CTGCGCAACG CCGGCATCGA GGTGCTGGAC
TGTATCCCGG TCACCGGCGA GATCACCGCC GAGAACGAAC ACTACCTGCG TACCAAGGCC
GATCGTGCCG GCCACATGCT GGATGTCGAC GCGCTGATCC AGGCTGCCCA GTAA
 
Protein sequence
MSASPGPAMS ASSLFGDPAA IRCERAVAEL RAGRPVLLHD GQGQRLAVIA LDSATASSFA 
AFASAARERH YLFLTATRAR VLGVEAPQGA RLPLAGVAFD ALPSLGYLRE PGPMPDGWSA
GDAFDAGAVE LARLGLLLPA MVAVRLDADD RTFDGAAEVA LCDLAEGAAH AAHDYELVAR
SPVPLRDVGM TTFAVFRGGV AQRDQVAIIV GEPDLSAVVP VRVHSSCLTG DLFGSLKCDC
GDQLRRGLRK LKELGGGVLL YLDQEGRGTG IAAKMRAYGY QHDGLDTIDA DAQLGFGADE
RRYGSAVAML RGLGIARVAL LSNNPTKAQR LRNAGIEVLD CIPVTGEITA ENEHYLRTKA
DRAGHMLDVD ALIQAAQ