Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3549 |
Symbol | |
ID | 6474428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3990009 |
End bp | 3993386 |
Gene Length | 3378 bp |
Protein Length | 1125 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732747 |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_002029931 |
Protein GI | 194367321 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACC CGCTGTATGG CCGTTCGTCC CACTCCCGTT CCCCGCGCAG CCGCTTGGCG CTGGCAGTTG CCAGTTGCCT GTTGTTGGCT GCTGCCACGC CCGCCACCGC CAGCGCATCA CTCGACACCT GGCAGCAACA GCGCCAGTTG CAGGCAGCTT GGGCGCAACC GGCCACTTCG GCGATCCCTT CCTCAACGGC TCAGTTTCCG GTTGCAGCAC CCACAGCGGC AACCAGCACC ACGGCGACCC TCGGCAATCC GGGCGACCCG GCCAGTTGGC GCACGGACGA ATTCAACGCC GACTGGGGTT TGGCTGCGAC CAACGCCGAC CATGCCTATG CGCGTGGCCT GACCGGTACC GGCATCCGCC TGGGCGTTTT CGACAGTGGC ACAGGCCTGG ACCACCCGGA GTTCGCCGGC AAGAACCATC GCAGCCTGCG TCTGGCCGAT GTGCTTGCCG ATGGCAGCCT GTGCGACCGC GAGGTACTCG ACGGCCCGGA TGCCTGCTTC ACCAGCGACG GCAACCAGGT TGCTATCGAT TACACCCTGA TTGATCCGGC CTACAGAGAC CTGCTCAATC GAAACGGCTA CTTCGAGGGT CCGGGCTACA ACGTGCACGG CACCCATGTA TCCGGAACCA TCGCCGCCAA CCGCGATGGC AATGGAATGC ACGGCGTCGC GTTCGGCGCT GACCTCACCG TAGCCCGCCT GTTTGCCAAC AGCGTGAACT ACCTGACCGT CGTCGAGCGG GATGGCGGAC TGTACCTGGA CAGTAAGTCG GTTGCCGCGC TGGGAGCCTC CGATTCGATC TTCCCGCAGC TGTACGCACA GCTCAACGAA CAGCACGTAC GCGCAGTCAA CCATAGTTGG GGCCTGACCA ACGAACCGGA CACCGCCGAG AAACTCGACT TCTATCTGTC GCATCCGGAT CTTGCGGACA GCCTCGGCGC GATAGCAGAA GGCTCACGTG CCCGCGGCCT GATCCAGGTA TGGGCTGCGG GAAACACCGA CTCGGTCAAT CCCTCACCAG AGCAGGCACC GATAGCAGGC ATGTATGCAT CGATGCCACG CGCCTTCACT GACATCGAGC CGTACTGGTT GGCCGTAGTC AACGTCAACC AGGCCCTGGA GCTGAGCAAT CGCTCGATGC GCTGCGGCCT GGCCGCAAAC TGGTGCCTGG CCGCGCCGGG TTCGAACATC AATTCGACCG TCTATGGCGA AGACTCGGTC ATTGATGCCA TCCCCCGCGA GGACAATGGC AATGTGATCC TCGAGGTCTC CGGTCAGGCC CCAACTTATG CCTACGGGAA CCTGAGCGGC ACCTCCATGG CGGCACCCCA TGTAACCGGC GCGCTGGGCC TGCTGTTCGA GCGCTTCCCC TATCTGGACA GTGCGCAGGT CCGCGACGTG CTATTGACCA CCGCGCGCGA TCTTGGCGCA CCAGGCATCG ATGAGATCTA TGGCTGGGGC CTGATGGACC TGCGCAAGGC CATCGAAGGC TACGGCTCGC TGCGCGTGGA TACCAACGTG GTGATGAACC AGAAGGCCGG TGGCCTGAAG GTGTGGGAAG GCGACGCCTG GGATGACTGG ACCAACGACA TCGGCGGCGC TGGCAAGCTG ACCAAGTCCG GCATCGGCTG GCTGCGCCTG AGTGGCGACA ACAGCTTCAA CGGCGCGGTA CTGCAGGACG GCACGTTGGA ATTGAACGGC ACCAACACAC TCACGTCAGC GGTCGAGGTC CAGGGTGGCC AGTTCCTGCT CAACGGTTCG CTGGTTTCCA CCGCCTTGAA CACCACTGGA GGCGTGAGCA CGGTCAGCAG CAGCGGCCTG CTGAAGGACA GCAACCTGAC CGTCGATGGC GGCGTGGTGT CCTTCAACGG CACGCAGACC GGCGGCACCA CCACGGTCGG TTCGAACGGC CTGTTGAAGG GCATCGGCAC ACTGGGCAAC ACCCGTGTGG ACGGCATCAT CGCGCCCGGC AATTCGATCG GCACGCTGAC CATCAACGGC AACTACGTGC AGGGTGCAAC CGGCGTCTAT GCCGCCGAAC TTGCCCCGGG CGGCCGCAGT GACCAGTTGC ACGTAACCGG CACCGCCACT CTCGGCGGTA CCCTGGTCGC ACTGCCGGAG CCGGGTACCT ACTACCTCGG CGAGCAGTTC AATTTCATCC GCGCCGACGG CGGTGTCAGC GGCCAGTTCG CGAAAACCGA TTTCAGCGCG TTCTCGCCGT TCCTGCAGTT CAGCCTGGCC TACGGTGCCA ATGGCACCCG CATCGACGTG GCACGCGGCG CCTCTCTGGC CAGTGCTGCT GCCACGCCGA ACCAACGCGC AGTGGCCACC AGCGCCGATG GACTGGCGAT CAACCAGGGC CTGCCCAAGC CGCTGACCCA ACTGTTCCCG CAACAGGTAG GTGGCGTGCT CGACGGTCTC AGCGGCGAAC TGCATCCGGC CACGGCACTG GCCCTGGTCG AGGGCAGCCG CTACGTGCGT GATGCCGCGC TGTCGCGCCG TGCCGGTACC ACCGCGCCAG GTGCCGACGC GGGCGATGCC ACCGGCGCCT GGGTGCAGGC ACTCGGCGGC AACAGCAAGC TGGATGGCAA CAGCAACACC GCCCGCACCG AAGCCAACAG CAACGGCCTG TTGATCGGCA TCGACCGCGA GTTCTCCGGC TGGCAGGTGG GCGTGCTGGC CGGTACCGGC CGTACCGACG TGAAGCAGCA GGAGCGTCGT GCCAAGTCGA AGATCGACAA CACGCACTTC GGCGCCTACG CCAGCCACAA CTGGGGCGGC TTCGGCCTGC GCGGCGGTGT GGCCTGGAGC AAGCACGAGG TGAAGAGCAC GCGCGACGTG GCGTTCGCTG GCTTCAGCGA CAGCCTGAGC GCACGCTACG ACGCCCGCAC CCGCCAGGCC TTCATCGAAG CCGGTTACCG CTTCGGTGGT CCGGAAGCCG GGCTGGAACC GTACCTGCAG GTTGCGCGCG TGGAAGTGGA CCTCAAGCGC ATCAACGAAC GCGGTGGTGC GGCCGCCCTG CAGGGCAAGG TGGATGACAC CGCAACCACG ATCGCTACCG CTGGCCTGCG CTTCGACAAG GGCCTGAAGG CCTCGTTCCA GCAGGACAGC TGGCTGCACC TGCGCGGTGG CGTGGGCTAT CGCCGCGCCT CTGGCGACCG CAGCCAGGTG GCCAACCTGG CCTTCGCCAA CAGCAGCAGC ACCTTCGCGG TCGAGGGCGC ACCAATTGCC GACAACGCCG TGGTGGCCGA GCTGGGCCTG TCGGCATGGC TGACCCCGCG GCAGCAGCTG GAGCTGGGTT ACAGCGGCCA GTTCGGCAGT GAAAGCCGCG ACCATGGTGC CAATGCACGC TGGTCGGTCC GCTTCTAG
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Protein sequence | MNHPLYGRSS HSRSPRSRLA LAVASCLLLA AATPATASAS LDTWQQQRQL QAAWAQPATS AIPSSTAQFP VAAPTAATST TATLGNPGDP ASWRTDEFNA DWGLAATNAD HAYARGLTGT GIRLGVFDSG TGLDHPEFAG KNHRSLRLAD VLADGSLCDR EVLDGPDACF TSDGNQVAID YTLIDPAYRD LLNRNGYFEG PGYNVHGTHV SGTIAANRDG NGMHGVAFGA DLTVARLFAN SVNYLTVVER DGGLYLDSKS VAALGASDSI FPQLYAQLNE QHVRAVNHSW GLTNEPDTAE KLDFYLSHPD LADSLGAIAE GSRARGLIQV WAAGNTDSVN PSPEQAPIAG MYASMPRAFT DIEPYWLAVV NVNQALELSN RSMRCGLAAN WCLAAPGSNI NSTVYGEDSV IDAIPREDNG NVILEVSGQA PTYAYGNLSG TSMAAPHVTG ALGLLFERFP YLDSAQVRDV LLTTARDLGA PGIDEIYGWG LMDLRKAIEG YGSLRVDTNV VMNQKAGGLK VWEGDAWDDW TNDIGGAGKL TKSGIGWLRL SGDNSFNGAV LQDGTLELNG TNTLTSAVEV QGGQFLLNGS LVSTALNTTG GVSTVSSSGL LKDSNLTVDG GVVSFNGTQT GGTTTVGSNG LLKGIGTLGN TRVDGIIAPG NSIGTLTING NYVQGATGVY AAELAPGGRS DQLHVTGTAT LGGTLVALPE PGTYYLGEQF NFIRADGGVS GQFAKTDFSA FSPFLQFSLA YGANGTRIDV ARGASLASAA ATPNQRAVAT SADGLAINQG LPKPLTQLFP QQVGGVLDGL SGELHPATAL ALVEGSRYVR DAALSRRAGT TAPGADAGDA TGAWVQALGG NSKLDGNSNT ARTEANSNGL LIGIDREFSG WQVGVLAGTG RTDVKQQERR AKSKIDNTHF GAYASHNWGG FGLRGGVAWS KHEVKSTRDV AFAGFSDSLS ARYDARTRQA FIEAGYRFGG PEAGLEPYLQ VARVEVDLKR INERGGAAAL QGKVDDTATT IATAGLRFDK GLKASFQQDS WLHLRGGVGY RRASGDRSQV ANLAFANSSS TFAVEGAPIA DNAVVAELGL SAWLTPRQQL ELGYSGQFGS ESRDHGANAR WSVRF
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