Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3543 |
Symbol | |
ID | 6474422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3985808 |
End bp | 3986482 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732741 |
Product | Transcriptional regulator TetR |
Protein accession | YP_002029925 |
Protein GI | 194367315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.32802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGT TCATCGCGCA CCTGCAGACA CCGGCGCGAC GGCGGGCGGC TGAGACACGC AGCGAACAGA CCCGGACCCG GTTGCTGCAG GCTGGACTGC AGTTGTTCAG TGCACTGGGA GTGGAAGGCG TGCGCACCCG TCAACTGGTG GATATTGCAG GCTGCAGCCA ATCCGCCATT CCCTACCACT TCGGCGGCAA GCTGGAACTG TATGCCGCCG TACTCAGGCG CGCCGCACAG GCCATCGCTG AACAGCTGCC GCTGCCCGCG GTACCACCCG CCGGTCCACG CCAGGCCGCA CAGCAGCTGC AGCGGCTGAT GCGGGCATTC GTGCACGCGC TGCTGGCTGC ACCCGATGCA AGTGCGCGGA CCCTGTTGCT GGCCCGCGAG CAGATCCAGC CGACGGCCGC GTTCGCCCGT GTCCACCATG AGCTGTTCGG GCCTCTGCAT GCGGCATTGG CCGAATGCGT CGCTCATCTT CGAGGCGCCG ATGCATCCAG CATGGAGACG GTGCTGCGTA CCCACGCACT GCTCGGCCAG GCGATCGTCT TTGCTGTCTC GCACGGCGCC CTGCAGGCGC GGCTTGGAGA AACGGCAGCG GCAGCCGACG TGGAGACAAT TGCAGCCATC GTCGGCGGTA TGGCTCTGGC CGCAGCCCGG GCGGCGCCAG CCTGA
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Protein sequence | MPEFIAHLQT PARRRAAETR SEQTRTRLLQ AGLQLFSALG VEGVRTRQLV DIAGCSQSAI PYHFGGKLEL YAAVLRRAAQ AIAEQLPLPA VPPAGPRQAA QQLQRLMRAF VHALLAAPDA SARTLLLARE QIQPTAAFAR VHHELFGPLH AALAECVAHL RGADASSMET VLRTHALLGQ AIVFAVSHGA LQARLGETAA AADVETIAAI VGGMALAAAR AAPA
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