Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3535 |
Symbol | |
ID | 6474414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3974725 |
End bp | 3976770 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642732733 |
Product | TonB-dependent receptor |
Protein accession | YP_002029917 |
Protein GI | 194367307 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.243459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGT CGTCCCACCT CCGTAGCGCG CGCCTGTCGC GTACCCGCCT GGCCACTGCC CTGTCTGCCG CCTGCCTGCT AGCCCTGCCC GGCCTGGCCG CCGCCGAAGC CAGCGCCGAT GCCTCCACCA AGGACCTGGA TACCGTGGTG GTCACCGCCT CGGGCAACCA GCAATGGATC AAGGATGCCC CGGCCAGCAT CAGCGTGATC AGCCGCGAGG ACATCGCGCG CCAGCCGGTG CATGACCTGG CCACCCTGCT CAGCCGCGTT CCGGGCGTGA CCGGTGGCCT CAGCGCCGTT GGCGAACAGT CCAAGATCAA GCTGCGCGGC ATGCCGTCCA ACTACACGCT GGTGCTGGTG GACGGCAAGC GGATGGGCAG TTCGGCCTCG ACCAACTATC GCCCCGATCT GGGCCGCCAG GATCTGAACT GGATCTCGCC CGACCAGATC GAGCGCATCG AAGTGGTCCG CGGGCCGATG TCGTCGCTGT ACGGCTCCGA CGCCATGGGC GGCGTGATCA ACATCATCAC CCGCCGCATC GGCGACGAAT GGAACGGCAG CGCCACCCAC AGCTACACCC GCCCGGGTGA CGGCAAGCGC GGCGACACCC AGCAGATCGG CGCGACCTTC TCCGGCCCGC TCGGCGAGCG TTTCGGCCTG CGCATCGGTG CAAACAGCAT GCGCCGCGAT TCGGACCAGT CCAATGGCGG CGTCTACGGC AATGCCTATG CCGGCGAGAA GGACCGCAAT GTCGACGCAC TGCTGCAGTG GAAGCTCAGC GACGCGCAGG AACTGTCGCT GGAAGCCGGC CACGGCGTGC AGCAGTCCTT CATCGATGCC TCGCTGGAAA AGCAGGACGA AGGCGCCTGG GGTGCCAGTG AACTCAAGCG CAGTTCGCTG GCGCTCAACC ACGATGGCAA GTGGAACTTC GGCAACTCGA AGATCAGCGC GTACTGGACC GAGTACAAGA ATGACATCGG CGCCACCGGC CGCTCCGAGG CGACCGACAC GATCATCGAA GGCAGCCTGA CCACACCGTT CACCCTGGGC GTTGAACACC AGTTCGCCGT GGGTGGCCAG TGGAAGCGCC AGGAACTGAC CAACACCGAT ACCATCGGCC GCGCGCCGAT CGACTACGCC GGCAACGCGG TCAACGGCTC CGACCTGCAG GTGGATACCT GGGCGCTGTT CGTCGAGGAC GAGCTGAAGC TGCACCGCAC GCTGGCCCTG ACCCTGGGCG CGCGCCTGGA CCACCATGAG AAGTTCGGCG GCCACGTCAG CCCGCGTGCG TACCTGGTCT GGCATCCGGC CGAACAGTGG ACGATCCGCG GTGGCGTCTC CAAGGGCTTC CGTGCGCCCA GCCTGACCGA GAACTCGCCC AGCGCGGCCA CCCAGTCCGG CGGCCGTGGC TGCACCTCGC TGATCCCGCT GGGCTATACC CGTGGCGGCT GCTACATGGC CGGCAACCCG GACCTGGATC CGGAAACCAG CACCAACCGC GAGATCGGCA TCAGCTTCGA CAACGACCTG GTCGATGCCG GCCTGACCTA CTTCCATACC GACTTCAGGA ACAAGATCGA ATACGCACCG CTGGGCAAGT TCAACGGCAT CTGGTGGACG CGCATGAGCA ACGTGCAGCG CGCGCGTACC AGCGGCATGG AAGGCAACCT GAACTTCCGC TTCGGCGAGC ACTGGCGCTG GCGCACCTCG GCGACCTGGA TGAAGGAAGC CAAGAACCTG ACCACCGGCA GGAACCTGAT CGATACCCCG GAGTTCTCGG GCTACTCGTC GCTGGACTGG ACGCCCAACA CGACGTTCTC CAGCAGCCTG TCGGCGCAGT ACACCGGCAA GCAGACCGGC ACGGCGACGA CCTTCCTCAA GGCCTACACC CTGTATGACC TGACCGCCGC CTGGAACGTC AACGAGGTAC TGACCCTGCG TGGTGGCGTC AGCAACCTGG CCGACAAGAA GCTGTACGCG GAGGGCTCCA CCGACTACTT CGTGGCCGGG CGCAGCTACT TCCTGAGCAT GACCGCGCGC TTCTGA
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Protein sequence | MSLSSHLRSA RLSRTRLATA LSAACLLALP GLAAAEASAD ASTKDLDTVV VTASGNQQWI KDAPASISVI SREDIARQPV HDLATLLSRV PGVTGGLSAV GEQSKIKLRG MPSNYTLVLV DGKRMGSSAS TNYRPDLGRQ DLNWISPDQI ERIEVVRGPM SSLYGSDAMG GVINIITRRI GDEWNGSATH SYTRPGDGKR GDTQQIGATF SGPLGERFGL RIGANSMRRD SDQSNGGVYG NAYAGEKDRN VDALLQWKLS DAQELSLEAG HGVQQSFIDA SLEKQDEGAW GASELKRSSL ALNHDGKWNF GNSKISAYWT EYKNDIGATG RSEATDTIIE GSLTTPFTLG VEHQFAVGGQ WKRQELTNTD TIGRAPIDYA GNAVNGSDLQ VDTWALFVED ELKLHRTLAL TLGARLDHHE KFGGHVSPRA YLVWHPAEQW TIRGGVSKGF RAPSLTENSP SAATQSGGRG CTSLIPLGYT RGGCYMAGNP DLDPETSTNR EIGISFDNDL VDAGLTYFHT DFRNKIEYAP LGKFNGIWWT RMSNVQRART SGMEGNLNFR FGEHWRWRTS ATWMKEAKNL TTGRNLIDTP EFSGYSSLDW TPNTTFSSSL SAQYTGKQTG TATTFLKAYT LYDLTAAWNV NEVLTLRGGV SNLADKKLYA EGSTDYFVAG RSYFLSMTAR F
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