Gene Smal_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3535 
Symbol 
ID6474414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3974725 
End bp3976770 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content66% 
IMG OID642732733 
ProductTonB-dependent receptor 
Protein accessionYP_002029917 
Protein GI194367307 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.243459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGT CGTCCCACCT CCGTAGCGCG CGCCTGTCGC GTACCCGCCT GGCCACTGCC 
CTGTCTGCCG CCTGCCTGCT AGCCCTGCCC GGCCTGGCCG CCGCCGAAGC CAGCGCCGAT
GCCTCCACCA AGGACCTGGA TACCGTGGTG GTCACCGCCT CGGGCAACCA GCAATGGATC
AAGGATGCCC CGGCCAGCAT CAGCGTGATC AGCCGCGAGG ACATCGCGCG CCAGCCGGTG
CATGACCTGG CCACCCTGCT CAGCCGCGTT CCGGGCGTGA CCGGTGGCCT CAGCGCCGTT
GGCGAACAGT CCAAGATCAA GCTGCGCGGC ATGCCGTCCA ACTACACGCT GGTGCTGGTG
GACGGCAAGC GGATGGGCAG TTCGGCCTCG ACCAACTATC GCCCCGATCT GGGCCGCCAG
GATCTGAACT GGATCTCGCC CGACCAGATC GAGCGCATCG AAGTGGTCCG CGGGCCGATG
TCGTCGCTGT ACGGCTCCGA CGCCATGGGC GGCGTGATCA ACATCATCAC CCGCCGCATC
GGCGACGAAT GGAACGGCAG CGCCACCCAC AGCTACACCC GCCCGGGTGA CGGCAAGCGC
GGCGACACCC AGCAGATCGG CGCGACCTTC TCCGGCCCGC TCGGCGAGCG TTTCGGCCTG
CGCATCGGTG CAAACAGCAT GCGCCGCGAT TCGGACCAGT CCAATGGCGG CGTCTACGGC
AATGCCTATG CCGGCGAGAA GGACCGCAAT GTCGACGCAC TGCTGCAGTG GAAGCTCAGC
GACGCGCAGG AACTGTCGCT GGAAGCCGGC CACGGCGTGC AGCAGTCCTT CATCGATGCC
TCGCTGGAAA AGCAGGACGA AGGCGCCTGG GGTGCCAGTG AACTCAAGCG CAGTTCGCTG
GCGCTCAACC ACGATGGCAA GTGGAACTTC GGCAACTCGA AGATCAGCGC GTACTGGACC
GAGTACAAGA ATGACATCGG CGCCACCGGC CGCTCCGAGG CGACCGACAC GATCATCGAA
GGCAGCCTGA CCACACCGTT CACCCTGGGC GTTGAACACC AGTTCGCCGT GGGTGGCCAG
TGGAAGCGCC AGGAACTGAC CAACACCGAT ACCATCGGCC GCGCGCCGAT CGACTACGCC
GGCAACGCGG TCAACGGCTC CGACCTGCAG GTGGATACCT GGGCGCTGTT CGTCGAGGAC
GAGCTGAAGC TGCACCGCAC GCTGGCCCTG ACCCTGGGCG CGCGCCTGGA CCACCATGAG
AAGTTCGGCG GCCACGTCAG CCCGCGTGCG TACCTGGTCT GGCATCCGGC CGAACAGTGG
ACGATCCGCG GTGGCGTCTC CAAGGGCTTC CGTGCGCCCA GCCTGACCGA GAACTCGCCC
AGCGCGGCCA CCCAGTCCGG CGGCCGTGGC TGCACCTCGC TGATCCCGCT GGGCTATACC
CGTGGCGGCT GCTACATGGC CGGCAACCCG GACCTGGATC CGGAAACCAG CACCAACCGC
GAGATCGGCA TCAGCTTCGA CAACGACCTG GTCGATGCCG GCCTGACCTA CTTCCATACC
GACTTCAGGA ACAAGATCGA ATACGCACCG CTGGGCAAGT TCAACGGCAT CTGGTGGACG
CGCATGAGCA ACGTGCAGCG CGCGCGTACC AGCGGCATGG AAGGCAACCT GAACTTCCGC
TTCGGCGAGC ACTGGCGCTG GCGCACCTCG GCGACCTGGA TGAAGGAAGC CAAGAACCTG
ACCACCGGCA GGAACCTGAT CGATACCCCG GAGTTCTCGG GCTACTCGTC GCTGGACTGG
ACGCCCAACA CGACGTTCTC CAGCAGCCTG TCGGCGCAGT ACACCGGCAA GCAGACCGGC
ACGGCGACGA CCTTCCTCAA GGCCTACACC CTGTATGACC TGACCGCCGC CTGGAACGTC
AACGAGGTAC TGACCCTGCG TGGTGGCGTC AGCAACCTGG CCGACAAGAA GCTGTACGCG
GAGGGCTCCA CCGACTACTT CGTGGCCGGG CGCAGCTACT TCCTGAGCAT GACCGCGCGC
TTCTGA
 
Protein sequence
MSLSSHLRSA RLSRTRLATA LSAACLLALP GLAAAEASAD ASTKDLDTVV VTASGNQQWI 
KDAPASISVI SREDIARQPV HDLATLLSRV PGVTGGLSAV GEQSKIKLRG MPSNYTLVLV
DGKRMGSSAS TNYRPDLGRQ DLNWISPDQI ERIEVVRGPM SSLYGSDAMG GVINIITRRI
GDEWNGSATH SYTRPGDGKR GDTQQIGATF SGPLGERFGL RIGANSMRRD SDQSNGGVYG
NAYAGEKDRN VDALLQWKLS DAQELSLEAG HGVQQSFIDA SLEKQDEGAW GASELKRSSL
ALNHDGKWNF GNSKISAYWT EYKNDIGATG RSEATDTIIE GSLTTPFTLG VEHQFAVGGQ
WKRQELTNTD TIGRAPIDYA GNAVNGSDLQ VDTWALFVED ELKLHRTLAL TLGARLDHHE
KFGGHVSPRA YLVWHPAEQW TIRGGVSKGF RAPSLTENSP SAATQSGGRG CTSLIPLGYT
RGGCYMAGNP DLDPETSTNR EIGISFDNDL VDAGLTYFHT DFRNKIEYAP LGKFNGIWWT
RMSNVQRART SGMEGNLNFR FGEHWRWRTS ATWMKEAKNL TTGRNLIDTP EFSGYSSLDW
TPNTTFSSSL SAQYTGKQTG TATTFLKAYT LYDLTAAWNV NEVLTLRGGV SNLADKKLYA
EGSTDYFVAG RSYFLSMTAR F