Gene Smal_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3531 
Symbol 
ID6474410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3969807 
End bp3970538 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID642732729 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_002029913 
Protein GI194367303 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGTAG TCATCGCCGA TGACGAACCG CTGGCACGCG AGCGCCTGCG CAGCCTGCTG 
GCAGCGCAGG ACGGCGTGGA TGTGGTGGCC GAGGCCGGCA ACGGCGAGCA GGCCCTGCAC
GCGTGCGCGG AACTGCAGCC GGACCTGGTC CTGCTGGATA TCGCGATGCC CGGGCTGGAT
GGCCTGGAAG CCGCCCGCCA CCTGGCCAGC TTCGAGCCGC GCCCGGCGGT GGTGTTCTGC
ACTGCTTACG ATGCGCATGC GCTGTCGGCG TTCGAGGCGG CCGCGATTGA TTACCTGATG
AAGCCGGTTC GTGCCGAGCG GTTGGCGGCA GCGATCGCAC GTGCACGCAC GTTCCTGGCC
GGCCGTGATG GCCAGCCGCA GGACCACCGC GGGCAGCAGG CCCGCAGCAT GCTGTGCGCG
CGCCTGCGCG GCAGCCTGCG CTTGATTCCG CTGGACGACA TCCATTACCT GCAGGCCGAA
GAGAAGTACG TGGTGGTGCA CCACGCGCGC GGCGAGGACC TGATCGAGGA GTCGTTGAAG
TCGCTGGAAG AAGAGTTCGC CAGCCGCTTC ATCCGCATCC ATCGCAACTG CCTGGTGGCG
CGCCACGAAC TGGTCGAGCT GCGCCGTGGC ACGGGTGGGC AGGTGCAGGC GGTGCTGCGG
CATGGCAAGC AACCGCTGGA AGTCAGCCGC CGCTGCGTGG CGACGCTGAA GCAAGAACTG
CGGCATTTGT AG
 
Protein sequence
MRVVIADDEP LARERLRSLL AAQDGVDVVA EAGNGEQALH ACAELQPDLV LLDIAMPGLD 
GLEAARHLAS FEPRPAVVFC TAYDAHALSA FEAAAIDYLM KPVRAERLAA AIARARTFLA
GRDGQPQDHR GQQARSMLCA RLRGSLRLIP LDDIHYLQAE EKYVVVHHAR GEDLIEESLK
SLEEEFASRF IRIHRNCLVA RHELVELRRG TGGQVQAVLR HGKQPLEVSR RCVATLKQEL
RHL