Gene Smal_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3479 
Symbol 
ID6476758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3913051 
End bp3915183 
Gene Length2133 bp 
Protein Length710 aa 
Translation table11 
GC content64% 
IMG OID642732677 
ProductOligopeptidase B 
Protein accessionYP_002029861 
Protein GI194367251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1770] Protease II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.607992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA CCCTCTGCCT GTTGCTTGCC AGCCTGATGA CCACCACCGC TACCGCAGCC 
ACTCCGCCCG TTCCGCCGGA TGCCGCCAAG CATCCGCACG TGGTCAAGGC GCCGTTCGGC
GCGACCCGCA ACGACGACTA TTACTGGCTG CGCGACGACA AGCGCGAGAA CAAGGACATG
CTGGCCTACC TGCAGGCCGA GAATGCCTAT GCCGACCAGC TGCTGGCACC GCTGAAGCCA
CTGGAAGACT CCCTGTACAA GGAGATCGTC GGCCGCATCA AGCAGGACGA TTCCAGCGTG
CCGGCGCGTG AGCGCGGCTA CTGGTACTAC AGCCGCTACG AGACCGGCCA GGACTACCCC
ATCCATGCGC GCCGCAAGGG TGCGATGGAA GCGCCCGAAG AGATCCTGCT CGACGTCAAT
GCACTGGCCG CCGGCAAGGG TTACTTCAGT GTCGGCTCGA TGGAGGTCAG CCAGGACAAC
CAGCTGTTGG CCTGGGCCGA TGATGACGTC GGCCGCCGCC AGTACACCAT TCGCTTCAAG
GACCTGCGCA CCGGCCAGGT GCTGCCCGAT GTGATCAGCG GCAGCTCCGG TGATCTGGTC
TGGGCCGACG ACAACCGCAC CGTGCTGTAC GTCGAAAATG ATCCGGAAAC GCTGTTGACC
GTGCGCGTGA AGAAGCACGT GCTGGGCACC CCGGCCAGCG CCGACACCGT CGTCTACGAA
GAGAAGGACG ACAGTTTCTA CATGGGCCTC GGCCGCACCC GCGACGACCG CTTCATCACC
ATCGGCGTGC ACAGCACCGT GTCCTCGGAA GAGCGCTACG CACCGGCCGG TGATCCGACC
ACCTTCACCG TGCTTGCGCC GCGCCAGCGC GATGTCGAGT ATGACGCCGA CCACTACGAT
GGCCGCTGGG TGATCCGCAC CAACGACGGT GCGAAGAACT TCAAGCTGGT CACCGCGCCC
ACCGATGCGA CCTCGCGTTC GCAGTGGCAG GACTGGATCG CGCACGACGC CGCGGTGTTC
ATCGAAGGCT TCGAACTGTT CGATACCTAC ACCGCCATCG CCGAACGTTC CGAAGGCCTG
GAGCGCATCC GCCTGCTGTT CAAGGATGGC CGCAGCGATT ACGTGAAGGC TGATGAGCCG
GCGTATTCCA TGGGCCTGGG CGACAACACC GAGGCCGATA CACCGTGGCT TCGTTACGTC
TACACCTCGA TGACCACCCC GACTACGGTG TTCGAGCTGA ACACTGCCAC AGGCGAGCGC
CGTCAGCTGA AGCAGCAGCC GGTGATCGGC TATGACGTAT CGAAGTACGA AACCGACCGT
GTGTGGATCA CCGCACGTGA CGGGGTCAAG GTGCCGGTGT CGCTGGTCTA CCGCAAGGGC
TACCAGAAGG ATGGCAAGGG CGCGCTGTTC CAGTACGCCT ACGGCAGCTA CGGCATGTCG
ATGGACCCGT ACTTCAACCA GACCGCGGTG AGCCTGCTCG ATCGCGGCGT GGTGTATGCC
ATTGCGCATA TCCGCGGCGG CCAGGAAATG GGCCGTGACT GGTACGAGAC CGGCAAGCTG
CTGCACAAGC AGAACACCTT CAACGATTTC ATCGACGTCA CCCGTGGCCT GGTGGCACAG
GGTTGGGCGG CGAAAGATCG CGTGGCCGCC TCCGGTGGCA GTGCCGGAGG CCTGCTGATG
GGCGCGGTGG CCAACCAGGC GCCGCAGGAC TACCGGGTGA TGGTGGCGCA GGTGCCGTTC
GTCGACGTGG TCACCACCAT GCTCGACCCG ACCATTCCGC TGACCACCAA CGAGTACGAC
GAGTGGGGCA ACCCGGAGCA GAAGCCGTAC TACGACTACA TGCTGTCCTA CTCGCCCTAT
GACAACGTGA AGAAGCAGGC CTACCCGGCG CTGTTCGTGG GCACCGGCCT GTGGGATTCG
CAGGTGCAGT ACTGGGAGCC GGCCAAGTGG GTGGCCAAGC TGCGTGACGA CAACACCGGC
CATCTTCCGA TCCTGTTCCG CACCAACATG GAAGCCGGTC ACGGTGGCAA GTCGGGGCGC
TTCCAGCGCT ACCGTGAGCT GTCCGAGTCA TACGCTTTCG TGCTGCAGCA GCTGGGTATC
CAGGGCCCGG CCGGCGCCGC TGCGGCGGAA TGA
 
Protein sequence
MKSTLCLLLA SLMTTTATAA TPPVPPDAAK HPHVVKAPFG ATRNDDYYWL RDDKRENKDM 
LAYLQAENAY ADQLLAPLKP LEDSLYKEIV GRIKQDDSSV PARERGYWYY SRYETGQDYP
IHARRKGAME APEEILLDVN ALAAGKGYFS VGSMEVSQDN QLLAWADDDV GRRQYTIRFK
DLRTGQVLPD VISGSSGDLV WADDNRTVLY VENDPETLLT VRVKKHVLGT PASADTVVYE
EKDDSFYMGL GRTRDDRFIT IGVHSTVSSE ERYAPAGDPT TFTVLAPRQR DVEYDADHYD
GRWVIRTNDG AKNFKLVTAP TDATSRSQWQ DWIAHDAAVF IEGFELFDTY TAIAERSEGL
ERIRLLFKDG RSDYVKADEP AYSMGLGDNT EADTPWLRYV YTSMTTPTTV FELNTATGER
RQLKQQPVIG YDVSKYETDR VWITARDGVK VPVSLVYRKG YQKDGKGALF QYAYGSYGMS
MDPYFNQTAV SLLDRGVVYA IAHIRGGQEM GRDWYETGKL LHKQNTFNDF IDVTRGLVAQ
GWAAKDRVAA SGGSAGGLLM GAVANQAPQD YRVMVAQVPF VDVVTTMLDP TIPLTTNEYD
EWGNPEQKPY YDYMLSYSPY DNVKKQAYPA LFVGTGLWDS QVQYWEPAKW VAKLRDDNTG
HLPILFRTNM EAGHGGKSGR FQRYRELSES YAFVLQQLGI QGPAGAAAAE