Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3479 |
Symbol | |
ID | 6476758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3913051 |
End bp | 3915183 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642732677 |
Product | Oligopeptidase B |
Protein accession | YP_002029861 |
Protein GI | 194367251 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1770] Protease II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.607992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCCA CCCTCTGCCT GTTGCTTGCC AGCCTGATGA CCACCACCGC TACCGCAGCC ACTCCGCCCG TTCCGCCGGA TGCCGCCAAG CATCCGCACG TGGTCAAGGC GCCGTTCGGC GCGACCCGCA ACGACGACTA TTACTGGCTG CGCGACGACA AGCGCGAGAA CAAGGACATG CTGGCCTACC TGCAGGCCGA GAATGCCTAT GCCGACCAGC TGCTGGCACC GCTGAAGCCA CTGGAAGACT CCCTGTACAA GGAGATCGTC GGCCGCATCA AGCAGGACGA TTCCAGCGTG CCGGCGCGTG AGCGCGGCTA CTGGTACTAC AGCCGCTACG AGACCGGCCA GGACTACCCC ATCCATGCGC GCCGCAAGGG TGCGATGGAA GCGCCCGAAG AGATCCTGCT CGACGTCAAT GCACTGGCCG CCGGCAAGGG TTACTTCAGT GTCGGCTCGA TGGAGGTCAG CCAGGACAAC CAGCTGTTGG CCTGGGCCGA TGATGACGTC GGCCGCCGCC AGTACACCAT TCGCTTCAAG GACCTGCGCA CCGGCCAGGT GCTGCCCGAT GTGATCAGCG GCAGCTCCGG TGATCTGGTC TGGGCCGACG ACAACCGCAC CGTGCTGTAC GTCGAAAATG ATCCGGAAAC GCTGTTGACC GTGCGCGTGA AGAAGCACGT GCTGGGCACC CCGGCCAGCG CCGACACCGT CGTCTACGAA GAGAAGGACG ACAGTTTCTA CATGGGCCTC GGCCGCACCC GCGACGACCG CTTCATCACC ATCGGCGTGC ACAGCACCGT GTCCTCGGAA GAGCGCTACG CACCGGCCGG TGATCCGACC ACCTTCACCG TGCTTGCGCC GCGCCAGCGC GATGTCGAGT ATGACGCCGA CCACTACGAT GGCCGCTGGG TGATCCGCAC CAACGACGGT GCGAAGAACT TCAAGCTGGT CACCGCGCCC ACCGATGCGA CCTCGCGTTC GCAGTGGCAG GACTGGATCG CGCACGACGC CGCGGTGTTC ATCGAAGGCT TCGAACTGTT CGATACCTAC ACCGCCATCG CCGAACGTTC CGAAGGCCTG GAGCGCATCC GCCTGCTGTT CAAGGATGGC CGCAGCGATT ACGTGAAGGC TGATGAGCCG GCGTATTCCA TGGGCCTGGG CGACAACACC GAGGCCGATA CACCGTGGCT TCGTTACGTC TACACCTCGA TGACCACCCC GACTACGGTG TTCGAGCTGA ACACTGCCAC AGGCGAGCGC CGTCAGCTGA AGCAGCAGCC GGTGATCGGC TATGACGTAT CGAAGTACGA AACCGACCGT GTGTGGATCA CCGCACGTGA CGGGGTCAAG GTGCCGGTGT CGCTGGTCTA CCGCAAGGGC TACCAGAAGG ATGGCAAGGG CGCGCTGTTC CAGTACGCCT ACGGCAGCTA CGGCATGTCG ATGGACCCGT ACTTCAACCA GACCGCGGTG AGCCTGCTCG ATCGCGGCGT GGTGTATGCC ATTGCGCATA TCCGCGGCGG CCAGGAAATG GGCCGTGACT GGTACGAGAC CGGCAAGCTG CTGCACAAGC AGAACACCTT CAACGATTTC ATCGACGTCA CCCGTGGCCT GGTGGCACAG GGTTGGGCGG CGAAAGATCG CGTGGCCGCC TCCGGTGGCA GTGCCGGAGG CCTGCTGATG GGCGCGGTGG CCAACCAGGC GCCGCAGGAC TACCGGGTGA TGGTGGCGCA GGTGCCGTTC GTCGACGTGG TCACCACCAT GCTCGACCCG ACCATTCCGC TGACCACCAA CGAGTACGAC GAGTGGGGCA ACCCGGAGCA GAAGCCGTAC TACGACTACA TGCTGTCCTA CTCGCCCTAT GACAACGTGA AGAAGCAGGC CTACCCGGCG CTGTTCGTGG GCACCGGCCT GTGGGATTCG CAGGTGCAGT ACTGGGAGCC GGCCAAGTGG GTGGCCAAGC TGCGTGACGA CAACACCGGC CATCTTCCGA TCCTGTTCCG CACCAACATG GAAGCCGGTC ACGGTGGCAA GTCGGGGCGC TTCCAGCGCT ACCGTGAGCT GTCCGAGTCA TACGCTTTCG TGCTGCAGCA GCTGGGTATC CAGGGCCCGG CCGGCGCCGC TGCGGCGGAA TGA
|
Protein sequence | MKSTLCLLLA SLMTTTATAA TPPVPPDAAK HPHVVKAPFG ATRNDDYYWL RDDKRENKDM LAYLQAENAY ADQLLAPLKP LEDSLYKEIV GRIKQDDSSV PARERGYWYY SRYETGQDYP IHARRKGAME APEEILLDVN ALAAGKGYFS VGSMEVSQDN QLLAWADDDV GRRQYTIRFK DLRTGQVLPD VISGSSGDLV WADDNRTVLY VENDPETLLT VRVKKHVLGT PASADTVVYE EKDDSFYMGL GRTRDDRFIT IGVHSTVSSE ERYAPAGDPT TFTVLAPRQR DVEYDADHYD GRWVIRTNDG AKNFKLVTAP TDATSRSQWQ DWIAHDAAVF IEGFELFDTY TAIAERSEGL ERIRLLFKDG RSDYVKADEP AYSMGLGDNT EADTPWLRYV YTSMTTPTTV FELNTATGER RQLKQQPVIG YDVSKYETDR VWITARDGVK VPVSLVYRKG YQKDGKGALF QYAYGSYGMS MDPYFNQTAV SLLDRGVVYA IAHIRGGQEM GRDWYETGKL LHKQNTFNDF IDVTRGLVAQ GWAAKDRVAA SGGSAGGLLM GAVANQAPQD YRVMVAQVPF VDVVTTMLDP TIPLTTNEYD EWGNPEQKPY YDYMLSYSPY DNVKKQAYPA LFVGTGLWDS QVQYWEPAKW VAKLRDDNTG HLPILFRTNM EAGHGGKSGR FQRYRELSES YAFVLQQLGI QGPAGAAAAE
|
| |