Gene Smal_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3430 
Symbol 
ID6476640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3859328 
End bp3860065 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID642732628 
Productpteridine reductase 
Protein accessionYP_002029812 
Protein GI194367202 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.425485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00917749 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGACA CCACCCCCGT GGTCCTGATC ACCGGCAGCG CGCGCCGGAT CGGTGCGGCC 
ATTGCCCGCC AGTTCCATGC CTGTGGCTGG TCGGTGGTGC TGCATGCCAA CACCTCCAGC
GCCGAGCTGC AGCAGGCCGC GTTCGATTTC GACAACGTGC GCCCCGGCAG CGTGCTGGCG
CTGCAGGCCG ACCTGCGTGA CGCCGATGCC CTGACCGATC TGGTGGAACA GGCCGTGACC
CACTTCGGCC GCCTGGATGC GCTGGTCAAC AACGCCTCCA ACTTCTTCCC TACCCCGCTG
GGCCAGGTCA CCGCCGAGGC GATGGACGAG CTGTATGCAG TCAACGCACG GGCGCCACTG
CTGCTGTCAC AGGCGGCAGC TCCGTACCTG CGCCGCCAGC ACGGCTGCAT CGTCAACCTG
ACCGACCTGC ACGGCACCGA CCCGATGCGC GACCACATCG CCTACACGAT GGCCAAGGCC
GCGCTGGAGA TGGCCACCCG CTCGCTGGCG CTGGAACTGG CGCCGAAGGT GCGGGTCAAC
GCAGTGGCCC CCGGCGCGAT CCTGTGGCCG GAACAGGGCA AGGACGATTT CGCCCGCGAG
GCGCTGCTGG CGCGCACGCC GCTGGCGCGG ATCGGCACCG TGGAAGAGAT CGCCGAGGCG
GTGTACTGGC TGGTGGCCGA TGCCAGCTTC GTCACCGGCC ATACCCTGCG CGTGGATGGC
GGGCGTACGG TCAGCTGA
 
Protein sequence
MSDTTPVVLI TGSARRIGAA IARQFHACGW SVVLHANTSS AELQQAAFDF DNVRPGSVLA 
LQADLRDADA LTDLVEQAVT HFGRLDALVN NASNFFPTPL GQVTAEAMDE LYAVNARAPL
LLSQAAAPYL RRQHGCIVNL TDLHGTDPMR DHIAYTMAKA ALEMATRSLA LELAPKVRVN
AVAPGAILWP EQGKDDFARE ALLARTPLAR IGTVEEIAEA VYWLVADASF VTGHTLRVDG
GRTVS