| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3413 |
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| Symbol | |
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| ID | 6476623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 3835940 |
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| End bp | 3837925 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642732611 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002029795 |
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| Protein GI | 194367185 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.439727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.575026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCG CCATGACCCG ACGCTCTTCA ACTGCCCTGT CCCTGCTGCC CTTGGCCACC
ACGCTGCTGA TCGGCTGCGC CAATGCCCAG TCCCTCGACG CCCAGAACGC GCAGCTGAAG
GCCGCGATCG CTGCCGCCGA ACGCGGCCAG TTCGATCCCG GCCAGGCCGC CGCACTCAGC
CGCCATCCAG CATACGGCTG GCTGGAGTAC GCCAACCTGC GCCGCAACAT CGACACCGTC
GATACCGCGC AGGCGCAGGC CTTCCTCAAG CGCTATGACG GCCAAGCCGT GGCCAATACC
TTCCGCAGTG TGTGGCTGCC CTCGGTCGCA CGCCGCCAGG ATTGGCCGAC CCTGCTGGCC
AACTGGACGC CCACCGACAA CGCCGGCCTG CGCTGTGCGC AGCTGACCGC ACGCCAGGTG
ACAGGCAAGG TCGATCCACA GTGGATCAGT GAAGCGCAGG ACCTGTGGCG CAAGAACGGC
AAATCACTAC CCGACGGCTG CGATGCGGTG TTTGCCGTGC TGCAGGCACA GGGTGGCCTG
AGCGACGCGC TGCGCTGGGA GCGCATCGAC GCCGCCGCCG ACGCGCAGCA ACCGGCCGTG
ATGCGCAGCG CTGCGCGCGG CCTGCCCGCC ACCGATCTGG CGCTGGCCAA CAACTACGCC
GCCTTCGTCG ACAAGCCCAA TGCCAGCGCA CTGAACTGGC CGCGCAACGA GCGCAGCCGG
CGCATCGCTA CCGACGGCCT GGCCAAGCTG GCCAAAGCCG ACCCCGGCGC CACCGAACAG
CAACTGCCGC AGTACGCCCA GGCGCTGGGC CTGAGTGCCG AGCAAAGCGG CCAGGTGCTG
TACCAGATCG CGCTGTGGAC GGTGGCCTCC TACCTGCCCG ATTCGGCGCG CCGCCTCAAC
GCGGTACCCG AATCGGCGTA CGACGAACGC CTGCACGAAT GGCGCGTGCG CGAAGCGATG
TCGCGCGGTG ACTGGCCGGC GGCGCTGACC GCGATCCGCA AGATGGCAAG CAAGCAGCGC
AGCGACCCGC GCTGGCGCTA CTTCGAAGGC CGCATGCTGG AGAAGACCGG CCAGGCCCAG
CAGGCGCAGG CGCTGTTCCG CGAGGCCGCA CGCGCACCGA CCTTCCACGG TTTCCTCGCC
GCCGACAAGC TGCAGCAGGG CTACACGCTA TGCCCGTGGA AGCCGAATGA CAGCGCGCAG
GCACAAGCCA CGATCGCACG CGATCCGGCC ATCCAGCGCG CGATGGCGCT GTACCAGATC
GACCGCGCCG GCTGGGCCGT GGCCGAGTGG AACAGCGCGC TGTCGCGCTT CGATGACACC
CAGCGCCGCC TTGCCGTGCG CGTGGCGCAG GACAACGGCT GGTTCGACCG CGCCGTGTTC
GCACTCGGCA AGCAGCCGCA GGAACAGCGC TTGTACGACC TGCGCTTCCC GCTGCACCAC
GACGCCACCA TCCGCCGCGA ATCGGCACGC AACGCGATCG ATCCGGCCTG GGTGGCGGCA
GAGATCCGCG CCGAGAGCAC CTTCACCCCG CGTGCGCGCT CGCCTGCCAA CGCCATGGGC
CTGATGCAGG TGCTGCCGGC CACCGGTGCC GGCGTGGCCA AGTCGATCGG TCTGACCGGC
TACGGCGGCG CCGACAGCCT GTACGACCCG GACACCAACA TCGCCATCGG TACCGCCTAC
CTGCGCCAGC TGATGAACAA GTACGACGGC CTGCCCTACG TGACCATCGC CGCCTACAAC
GCCGGCCCGA CCCCGACCGC CCGTTGGCAG AGCCAGCGCC CGGGTTACGA CCCCGACCTG
TGGATCGAGA CCATCAGCTA CAAGGAAACC CGCGAGTATG TGGCACGCGT GCTGGCCTTC
AGCGTGATCT ACGACTGGCG CCTCAATGGC GATGCATTGC CGCTGAGCGA CCGCCTGATG
GGCCGCCTGG TGGACAAGCG CAAGAGCTTC AGTTGCGCCG CCAACGCGGA CCAGGGCGGC
GATTGA
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| Protein sequence | MLVAMTRRSS TALSLLPLAT TLLIGCANAQ SLDAQNAQLK AAIAAAERGQ FDPGQAAALS
RHPAYGWLEY ANLRRNIDTV DTAQAQAFLK RYDGQAVANT FRSVWLPSVA RRQDWPTLLA
NWTPTDNAGL RCAQLTARQV TGKVDPQWIS EAQDLWRKNG KSLPDGCDAV FAVLQAQGGL
SDALRWERID AAADAQQPAV MRSAARGLPA TDLALANNYA AFVDKPNASA LNWPRNERSR
RIATDGLAKL AKADPGATEQ QLPQYAQALG LSAEQSGQVL YQIALWTVAS YLPDSARRLN
AVPESAYDER LHEWRVREAM SRGDWPAALT AIRKMASKQR SDPRWRYFEG RMLEKTGQAQ
QAQALFREAA RAPTFHGFLA ADKLQQGYTL CPWKPNDSAQ AQATIARDPA IQRAMALYQI
DRAGWAVAEW NSALSRFDDT QRRLAVRVAQ DNGWFDRAVF ALGKQPQEQR LYDLRFPLHH
DATIRRESAR NAIDPAWVAA EIRAESTFTP RARSPANAMG LMQVLPATGA GVAKSIGLTG
YGGADSLYDP DTNIAIGTAY LRQLMNKYDG LPYVTIAAYN AGPTPTARWQ SQRPGYDPDL
WIETISYKET REYVARVLAF SVIYDWRLNG DALPLSDRLM GRLVDKRKSF SCAANADQGG
D
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