Gene Smal_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3399 
Symbol 
ID6476609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3819875 
End bp3820579 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID642732597 
Productprotein of unknown function DUF125 transmembrane 
Protein accessionYP_002029781 
Protein GI194367171 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.233589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC ATTCACGACA CCCTGAGCTG CACCGCGCCG ACCGTGTCGG CTGGCTGCGT 
GCCGCCGTGC TGGGGGCAAA CGACGGCATC GTATCAGTGG CCGGCCTGGT CGTCGGCGTG
GCCGCCAGCG GCGCTTCGGC CAGCACGATC CTCGCCACCG GCATAGCCGG CACCGTAGCG
GGTGCGATGT CGATGGCTGC CGGTGAGTAT GTCTCCGTGC AGACCCAGGC CGACACCGAA
AACGCCGACC TGGCCATGGA GAAGCGTGAA CTGCACGAAG ACCCGCACAG CGAGCTGGAA
GAGCTGGCGG CGATCTACCG CCACCGCGGA CTGGAGCCGG CGCTTGCGCG GCAGGTCGCC
GAGCAGCTCA CCGCCCACGA TGCACTGGGC GCTCACGCCC GCGACGAGCT GGGCATCACC
GAAGAACTGC GCGCACGCCC GCTGCAGGCG GCGATGGCCT CGGCCAGCGC CTTCACCTGC
GGCGCCGCGC TGCCGGTGCT GACCGCGCTG CTGGCACCGG CCAACAAGGT GGCGATGATG
ACCACGGCCA GCACCCTGCT CGGCCTGTGC CTGACCGGCG CAATGGCCGC CCGGGCCGGC
GGTGCTTCGC CTGCACGCGG TGCGATCCGG GTAATGTTCT GGGGCGCGCT GGCAATGGCC
GCCGCTGCCG GTGTCGGCAG ACTGCTGGGA GCCCACGTGT CATGA
 
Protein sequence
MSRHSRHPEL HRADRVGWLR AAVLGANDGI VSVAGLVVGV AASGASASTI LATGIAGTVA 
GAMSMAAGEY VSVQTQADTE NADLAMEKRE LHEDPHSELE ELAAIYRHRG LEPALARQVA
EQLTAHDALG AHARDELGIT EELRARPLQA AMASASAFTC GAALPVLTAL LAPANKVAMM
TTASTLLGLC LTGAMAARAG GASPARGAIR VMFWGALAMA AAAGVGRLLG AHVS