Gene Smal_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3359 
Symbol 
ID6476569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3778190 
End bp3778885 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID642732557 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002029741 
Protein GI194367131 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC TGCTGGTCGA AGACAATCCG GATCTGGCCG ATGCCATCAT CCGCCGCATG 
CGCCGCAGTG GGCACGCCGT GGACTGGCAG GCCGATGGCC TGGCCGCTGC CAGCGTGCTG
CGCTACCAGA GCTTCGACCT GGTGGTGCTG GATATCGGGC TGCCCAAGCT GGATGGCCTG
CGCGTGCTTT CCGGCATGCG CGAGCGCGGC GACAGCACGC CGGTGCTGAT GCTGACCGCG
CGCGATGGCA TCGAAGATCG GGTGCAGGCG CTGGATGTCG GTGCCGACGA TTACCTGGGC
AAGCCATTCG ATTTTCGCGA GTTTGAAGCG CGTTGCCGCG TGCTGCTGCG GCGCGCGCGT
GGCCAGGCCA GTGAGGTGGT GCAGATCGGC GGGTTCCAGT TCGACAATGC CGCGCACCGC
GTCAGCCTCG ATGGCGAACC GATCGAACTG CCCAACCGCG AGTACCGGTT GCTGGAGATT
CTGGTCGGCC GCCTCGGCCA GGTGGTTGGC AAGGACGAAA TCGGCAATGG CCTGTTCGGC
TTCGATGACG AGGCCGGCCC GAATGCGATC GAGCTGTACA TCGGTCGCCT GAGAAAAAAA
CTGGCTGCTG CGCCGTTGCG CATCACTACG GTGCGCGGTG TCGGCTACCT GCTGGAAGCC
AGTGACGGCA GCACCGACGC CGACGCCGAT GGCTGA
 
Protein sequence
MRLLLVEDNP DLADAIIRRM RRSGHAVDWQ ADGLAAASVL RYQSFDLVVL DIGLPKLDGL 
RVLSGMRERG DSTPVLMLTA RDGIEDRVQA LDVGADDYLG KPFDFREFEA RCRVLLRRAR
GQASEVVQIG GFQFDNAAHR VSLDGEPIEL PNREYRLLEI LVGRLGQVVG KDEIGNGLFG
FDDEAGPNAI ELYIGRLRKK LAAAPLRITT VRGVGYLLEA SDGSTDADAD G