Gene Smal_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3346 
Symbol 
ID6476474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3757819 
End bp3758736 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID642732544 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_002029728 
Protein GI194367118 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATG CCACCACCGC CGTCCGCCCG TCGCTGCGCG ATCCCCGCAA CTGGCCGATG 
TTCGCCGCCA TGCTCGGCGC CTTCGCCATC GCCCGCCTGC CGTGGATGCT GCAGCGTGCG
CTGGGCCGTG GCGTCGGCTG GATCAGCTGG CGCCTGCTCG GCAGCCGCCG CCGCGCCGCC
GAAGTCAACC TCAAACTGTG CTTCCCGGAA AAGGACGAGG CCTGGCGACA GCGCCTGGTC
CGCGACAGCT TCGACGCACT GGGCGTGGGC GTACTCGAGT GCATCCGCGC CTGGTGGGGC
AGCATCGACC GCATCCGCCC GCAGGTGCAG ATCGAGGGTC TGGAACATCT GCGGCAGATG
CAGGCCGAGG GCCGTGGCGT GCTGCTGGTC TCCGGCCACT TCATGACGCT GGAGATGTGC
GGCCGCCTGC TGTGCGACTA CGTTGACCTG TCGGGCATGT ACCGCAAGCA CAAGAATCCG
GTATACGAGT GGGCGGTGAA GTTCGGTCGC CTGCGCTATG CCAAGGCGAT GTACGCCAAC
GAGGACATCC GCGCCACGGT GCGCCACCTG AAGAAGGGCG GCTTCCTCTG GTACGCGCCG
GACCAGGACA TGCGCGGCAA GGACACCGTG TTCGTGCCGT TCTTCGGCCA TACCGCATCC
ACCATTACCG CCACCCACCA GCTGGCACGG ATGACCGGCT GTGCGGTGAT CCCGTATTTC
CACCGCCGCG AAGGCGGGAA GTACTTCCTG AAGATCGGCG CGCCGCTGGA GAATTTTCCC
AGCGAGGACG TGGAAGCCGA TACCACGCGG GTCAACCAGG CCATCGAAGC GATGGTGCGC
GAAGCCCCCG ACCAGTACCT GTGGATCCAC CGCCGCTTCA AGCGCCAGCC CGGCGGGCGG
AGCGATTTCT ACAAATAA
 
Protein sequence
MSDATTAVRP SLRDPRNWPM FAAMLGAFAI ARLPWMLQRA LGRGVGWISW RLLGSRRRAA 
EVNLKLCFPE KDEAWRQRLV RDSFDALGVG VLECIRAWWG SIDRIRPQVQ IEGLEHLRQM
QAEGRGVLLV SGHFMTLEMC GRLLCDYVDL SGMYRKHKNP VYEWAVKFGR LRYAKAMYAN
EDIRATVRHL KKGGFLWYAP DQDMRGKDTV FVPFFGHTAS TITATHQLAR MTGCAVIPYF
HRREGGKYFL KIGAPLENFP SEDVEADTTR VNQAIEAMVR EAPDQYLWIH RRFKRQPGGR
SDFYK