Gene Smal_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3341 
Symbol 
ID6476469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3752056 
End bp3752736 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content66% 
IMG OID642732539 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002029723 
Protein GI194367113 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTC CCACTTCCCG CAAGCCGTCG GCCAAGCCCG CTGCCAAGGC CGCCGGGCCC 
GGGCGCCCCA AGGACCTCGG CAAGCGCGCG GCGATCCTTG AAGCAGCCAA GGCACTGTTC
ATCGAACAGG GCTATACCGG CGTGAGCATG GACACCATCG CCGCTCAGGC CGGCGTCTCG
AAGCTGACCG TGTACAGCCA CTTCGGCGAC AAGGAGACCC TGTTCTCCGA GGCCGTGCAG
TCAAAATGCA TTGAAATGCT GCCTGACGCG CTGTTCGTGG CCGACGCGGA CGGACCGTTG
CGCGACCAGC TGATCGGCAT CGGCCTGGCC TTCTTCGAGT TGATCACCTC CGACGCGGCG
ATCTCCATCC AGCGCATGAT GATGGCGCCG GAAACCGATG AGCGCCTGCG CGAGCTGTTC
TGGCAGGCCG GCCCGGAGCG CACCTGCGAG GCCCTGGCCG ACTTCCTGCG CGCGCGCGGC
GCGCGCGGCG AACTGGACAT CCCCGACTAT TACCTGGCTG GCCAGCAGTT CCTGACCCTG
GTCAAGGGCG AAGTGCACAT GCATATGATG TGCGGCATGC CACTGTCACC GGTGGAATGC
GACCCTCTCA CCCACGTGAC CGCCAGCATC GACTTCTTCC TGCGCGCCTA CGCGCCAAGA
GGGGCCGGGA CGGCCGGATA A
 
Protein sequence
MSSPTSRKPS AKPAAKAAGP GRPKDLGKRA AILEAAKALF IEQGYTGVSM DTIAAQAGVS 
KLTVYSHFGD KETLFSEAVQ SKCIEMLPDA LFVADADGPL RDQLIGIGLA FFELITSDAA
ISIQRMMMAP ETDERLRELF WQAGPERTCE ALADFLRARG ARGELDIPDY YLAGQQFLTL
VKGEVHMHMM CGMPLSPVEC DPLTHVTASI DFFLRAYAPR GAGTAG