Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3307 |
Symbol | hppA |
ID | 6476435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3708447 |
End bp | 3710474 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642732505 |
Product | membrane-bound proton-translocating pyrophosphatase |
Protein accession | YP_002029689 |
Protein GI | 194367079 |
COG category | [C] Energy production and conversion |
COG ID | [COG3808] Inorganic pyrophosphatase |
TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.903662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGAAC GTCACGGGCT GTCACTGGCG CTGGGCTGCG CCATTCTCGC GATCCTGTTC GGAATCGTCT CGGCGCGCTG GATCCTGCGC CAACCCACCG GCAATGAACG CATGGTCGCG ATCGCCACCG CGATCCAGGA AGGTGCGCGT GCCTACCTCA ACCGCCAGTA CCTGACCATC GGCGTCGCCG GCGTGGTGCT GTTCGTGCTG GTCGGCATCT TCCTCAGCTG GTACACCGCA GTCGGCTTCG CCATCGGCGC GGTGCTGTCC GGTGCCGCCG GCTACATCGG CATGAACGTC TCGGTACGCG CCAACGTGCG CACCGCCGAA GCTGCCCGCC ACGGCATCAG CGCGGCGATG GACGTCGCCT TCCGCGGCGG TGCGATCACC GGCATGCTGG TGGTCGGCCT CGGCCTGCTG GGCGTGGCCG GCTACTACGC ACTGCTGCTG CGCATGGGCC TGCCGATGGA ACAAGCGCTG CATGCCCTGG TGGGCCTTGC CTTCGGCTCC TCGCTGATCT CGATCTTCGC GCGGTTGGGC GGCGGCATCT TCACCAAGGG CGCGGACGTA GGTGCCGACC TGGTCGGCAA GGTCGAAGCC GGGATTCCCG AGGATGACCC GCGCAACCCG GCGGTGATCG CCGACAACGT CGGTGACAAC GTCGGCGACT GCGCCGGCAT GGCTGCCGAC CTGTTCGAGA CCTATGCGGT CACCGTGATC GCCACCATGC TGCTGGGCAG CCTGATGCTG GCCGAGGCCG GCGCCAATGC AGTGCTGTAT CCGCTGGTGC TGGGCGGCGT ATCGATCATC GCTTCGATCA TCGGCGCACT GTTCGTCAAG GTGAAGCCGG GCGGTTCGAT CATGGGCGCG CTGTACAAGG GCGTGATCGT CTCCGGCGTA CTGGCCGCGA TTGCGTTCTA CCCGATCACC ACCGGGTTGA TGAGTGACAA CGTGCATGGG CCGATGGCGC TGTATGGCTG CGCATTGATC GGGCTGGTGC TGACCGGCCT GATCGTGTGG ATCACCGAGT ACTACACCGG CACCCAGTAC AAGCCGGTGC AGCACGTGGC ACAGGCGTCG ACCACCGGCC ACGGCACCAA CATCATCGCC GGCCTCGGGA TCTCGATGAA GTCCACCGCA CTGCCCGTGA TCGCGGTGTG CGCGGCCATC TGGGGTGCGT TCGCGCTGGG TGGCCTGTAC GGCATCGCCA TCGCCGCCAC CGCAATGCTG TCGATGGCCG GCATGATCGT CGCCCTCGAT GCTTACGGGC CGATCACCGA CAACGCCGGT GGCATCGCCG AGATGGCTGA ACTGCCCTCG GAAATCCGCG ACATCACCGA TCCGCTGGAT GCGGTGGGCA ACACCACCAA GGCGGTGACC AAGGGCTATG CAATCGGTTC GGCGGCACTG GCCGCGCTGG TGCTGTTCGC CGACTACACC CATAACCTGC AGGCGGCCAA TCCCGGTCAG GAGTTCCGCT TCGACCTCAG CGACCACACG GTGATCATCG GCCTGCTGAT CGGCGGCCTG ATTCCTTATC TGTTCGGTGC GATGGCGATG GAAGCGGTCG GCCGCGCCGC CGGTGCGGTG GTAGAAGAAG TGCGCCGCCA GTTCCGCGAG ATCCCCGGCA TCATGCAGGG CACCGGCAAG CCGCAGTACG ACAAGGCGGT GGACATGCTG ACCCGCTCGG CGATCCGCGA AATGATCGTG CCCTCGCTGC TGCCGGTGGC GGTGCCGGTG GTGGTCGGCC TGCTGCTGGG GCCGCGCGCA CTGGGCGGCC TGCTGATCGG CACGATCGTG ACCGGCCTGT TCGTGGCCAT TTCGATGACC ACCGGCGGCG GCGCCTGGGA CAACGCCAAG AAGTACATCG AAGACGGCCA CTTCGGCGGC AAGGGCAGCG AGGCGCACAA GGCGGCAGTG ACCGGCGATA CCGTCGGCGA TCCCTACAAG GACACCGCCG GTCCGGCGAT CAATCCGCTG ATCAAGATCA TCAACATCGT GGCGCTGCTG CTGGTGCCGC TGCTGTAG
|
Protein sequence | MLERHGLSLA LGCAILAILF GIVSARWILR QPTGNERMVA IATAIQEGAR AYLNRQYLTI GVAGVVLFVL VGIFLSWYTA VGFAIGAVLS GAAGYIGMNV SVRANVRTAE AARHGISAAM DVAFRGGAIT GMLVVGLGLL GVAGYYALLL RMGLPMEQAL HALVGLAFGS SLISIFARLG GGIFTKGADV GADLVGKVEA GIPEDDPRNP AVIADNVGDN VGDCAGMAAD LFETYAVTVI ATMLLGSLML AEAGANAVLY PLVLGGVSII ASIIGALFVK VKPGGSIMGA LYKGVIVSGV LAAIAFYPIT TGLMSDNVHG PMALYGCALI GLVLTGLIVW ITEYYTGTQY KPVQHVAQAS TTGHGTNIIA GLGISMKSTA LPVIAVCAAI WGAFALGGLY GIAIAATAML SMAGMIVALD AYGPITDNAG GIAEMAELPS EIRDITDPLD AVGNTTKAVT KGYAIGSAAL AALVLFADYT HNLQAANPGQ EFRFDLSDHT VIIGLLIGGL IPYLFGAMAM EAVGRAAGAV VEEVRRQFRE IPGIMQGTGK PQYDKAVDML TRSAIREMIV PSLLPVAVPV VVGLLLGPRA LGGLLIGTIV TGLFVAISMT TGGGAWDNAK KYIEDGHFGG KGSEAHKAAV TGDTVGDPYK DTAGPAINPL IKIINIVALL LVPLL
|
| |