Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3287 |
Symbol | thiE |
ID | 6476415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3689029 |
End bp | 3689655 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642732485 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_002029669 |
Protein GI | 194367059 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.633287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCTG CTTCCCCGGC GCCCCGCGGC GTCTACCTGA TCACCCCGGA CGAGCCCGAT ACCGCGCGCC TGCTGGACCG CACCGCGCCG CTGCTGGCCG CCGGCGCCAC CTGGCTGCAG TACCGCAACA AGACCGCCAG TGACGCGCTG CGGCGCGAGC AGGCCACCGC CCTGCAGGCG CTGTGCGCGG AACACGGCGT GCCGCTGATC GTCAACGACG ACCCGGCGCT GGCCAAGGCG GTCGGCGCCG CCGGCGTGCA TCTGGGCGGC ACCGATGGCG ACATCCCCAG CGCGCGCGCC CTGCTCGGCG CGGATGCCAT CATCGGCGCG TCCTGCTACG ACCAGCTGGC CAATGCCGAA CAGGCCGTGG CCGCCGGCGC CAGCTACGTG GCCTTCGGCG CATTCTTCCC GACCACCACC AAGATCACCA CCAGCCGCGC CCATACCGAC CTGCTGCGGC AAAGCGCCGC ACTGGGCGTG CCGCGGGTGG CGATCGGCGG CCTGACGCCG GACAATGTCG GTCCCATCAT CGACGCCGGC GCCGATCTGG TCGCCGTGGT CAGCAGCGTG TTCGCCGCCG AAGACCCGGT GGCGACCCAG CGTGCCTACC TCGCCCAGTT CGCGTAA
|
Protein sequence | MTSASPAPRG VYLITPDEPD TARLLDRTAP LLAAGATWLQ YRNKTASDAL RREQATALQA LCAEHGVPLI VNDDPALAKA VGAAGVHLGG TDGDIPSARA LLGADAIIGA SCYDQLANAE QAVAAGASYV AFGAFFPTTT KITTSRAHTD LLRQSAALGV PRVAIGGLTP DNVGPIIDAG ADLVAVVSSV FAAEDPVATQ RAYLAQFA
|
| |